Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gfra3O35118 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Gfra3O35118 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Gfra3O35118 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Gfra3O35118 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Gfra3O35118 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gfra3O35118 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gfra3O35118 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.94■□□□□ 0.46
Gfra3O35118 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Gfra3O35118 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gfra3O35118 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gfra3O35118 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Gfra3O35118 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gfra3O35118 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gfra3O35118 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gfra3O35118 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gfra3O35118 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Gfra3O35118 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Gfra3O35118 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gfra3O35118 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.93■□□□□ 0.46
Gfra3O35118 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gfra3O35118 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gfra3O35118 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Gfra3O35118 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gfra3O35118 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gfra3O35118 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Gfra3O35118 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gfra3O35118 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gfra3O35118 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gfra3O35118 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gfra3O35118 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gfra3O35118 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Gfra3O35118 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Gfra3O35118 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Gfra3O35118 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gfra3O35118 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gfra3O35118 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gfra3O35118 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gfra3O35118 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gfra3O35118 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gfra3O35118 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.91■□□□□ 0.46
Gfra3O35118 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gfra3O35118 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gfra3O35118 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gfra3O35118 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.91■□□□□ 0.46
Gfra3O35118 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gfra3O35118 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gfra3O35118 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gfra3O35118 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gfra3O35118 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gfra3O35118 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Gfra3O35118 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.9■□□□□ 0.46
Gfra3O35118 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
Gfra3O35118 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Gfra3O35118 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gfra3O35118 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gfra3O35118 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gfra3O35118 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gfra3O35118 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gfra3O35118 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gfra3O35118 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Gfra3O35118 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gfra3O35118 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Gfra3O35118 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gfra3O35118 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gfra3O35118 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gfra3O35118 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gfra3O35118 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.88■□□□□ 0.45
Gfra3O35118 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Gfra3O35118 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.88■□□□□ 0.45
Gfra3O35118 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gfra3O35118 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gfra3O35118 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gfra3O35118 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gfra3O35118 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gfra3O35118 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Gfra3O35118 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
Gfra3O35118 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gfra3O35118 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.87■□□□□ 0.45
Gfra3O35118 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gfra3O35118 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gfra3O35118 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gfra3O35118 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.86■□□□□ 0.45
Gfra3O35118 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Gfra3O35118 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Gfra3O35118 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.86■□□□□ 0.45
Gfra3O35118 Gm9847-201ENSMUST00000052528 599 ntBASIC17.86■□□□□ 0.45
Gfra3O35118 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gfra3O35118 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
Gfra3O35118 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Gfra3O35118 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Gfra3O35118 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.85■□□□□ 0.45
Gfra3O35118 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Gfra3O35118 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gfra3O35118 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gfra3O35118 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gfra3O35118 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gfra3O35118 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.84■□□□□ 0.45
Gfra3O35118 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.84■□□□□ 0.45
Gfra3O35118 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms