Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ebf3O08791 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.56■■□□□ 1.04
Ebf3O08791 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Ebf3O08791 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ebf3O08791 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.56■■□□□ 1.04
Ebf3O08791 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Ebf3O08791 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ebf3O08791 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.55■■□□□ 1.04
Ebf3O08791 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.55■■□□□ 1.04
Ebf3O08791 Serp2-204ENSMUST00000228055 705 ntBASIC21.55■■□□□ 1.04
Ebf3O08791 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ebf3O08791 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ebf3O08791 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ebf3O08791 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ebf3O08791 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
Ebf3O08791 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Ebf3O08791 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ebf3O08791 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ebf3O08791 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ebf3O08791 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ebf3O08791 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ebf3O08791 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.54■■□□□ 1.04
Ebf3O08791 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ebf3O08791 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Ebf3O08791 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ebf3O08791 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ebf3O08791 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.53■■□□□ 1.04
Ebf3O08791 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ebf3O08791 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ebf3O08791 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ebf3O08791 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ebf3O08791 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ebf3O08791 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Ebf3O08791 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ebf3O08791 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ebf3O08791 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ebf3O08791 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.04
Ebf3O08791 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.52■■□□□ 1.04
Ebf3O08791 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Ebf3O08791 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
Ebf3O08791 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ebf3O08791 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.51■■□□□ 1.03
Ebf3O08791 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ebf3O08791 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
Ebf3O08791 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ebf3O08791 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ebf3O08791 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.5■■□□□ 1.03
Ebf3O08791 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.5■■□□□ 1.03
Ebf3O08791 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Ebf3O08791 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ebf3O08791 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.49■■□□□ 1.03
Ebf3O08791 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ebf3O08791 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.49■■□□□ 1.03
Ebf3O08791 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ebf3O08791 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ebf3O08791 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ebf3O08791 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ebf3O08791 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Ebf3O08791 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ebf3O08791 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ebf3O08791 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ebf3O08791 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
Ebf3O08791 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ebf3O08791 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ebf3O08791 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ebf3O08791 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ebf3O08791 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ebf3O08791 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ebf3O08791 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ebf3O08791 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
Ebf3O08791 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ebf3O08791 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.46■■□□□ 1.03
Ebf3O08791 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ebf3O08791 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ebf3O08791 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ebf3O08791 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
Ebf3O08791 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Ebf3O08791 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Ebf3O08791 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Ebf3O08791 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Ebf3O08791 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ebf3O08791 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ebf3O08791 Notumos-201ENSMUST00000151998 2659 ntBASIC21.45■■□□□ 1.02
Ebf3O08791 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
Ebf3O08791 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ebf3O08791 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ebf3O08791 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ebf3O08791 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Ebf3O08791 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ebf3O08791 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ebf3O08791 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ebf3O08791 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.43■■□□□ 1.02
Ebf3O08791 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.43■■□□□ 1.02
Ebf3O08791 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Ebf3O08791 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ebf3O08791 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ebf3O08791 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ebf3O08791 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ebf3O08791 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ebf3O08791 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms