Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gm3543D3Z235 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm3543D3Z235 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm3543D3Z235 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gm3543D3Z235 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Gm3543D3Z235 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm3543D3Z235 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Gm3543D3Z235 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm3543D3Z235 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm3543D3Z235 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm3543D3Z235 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.72■□□□□ 0.59
Gm3543D3Z235 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm3543D3Z235 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm3543D3Z235 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.72■□□□□ 0.59
Gm3543D3Z235 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gm3543D3Z235 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.72■□□□□ 0.59
Gm3543D3Z235 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gm3543D3Z235 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.72■□□□□ 0.59
Gm3543D3Z235 Gm10399-202ENSMUST00000202768 748 ntBASIC18.72■□□□□ 0.59
Gm3543D3Z235 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.72■□□□□ 0.59
Gm3543D3Z235 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm3543D3Z235 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.71■□□□□ 0.59
Gm3543D3Z235 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gm3543D3Z235 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.71■□□□□ 0.59
Gm3543D3Z235 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Gm3543D3Z235 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.71■□□□□ 0.59
Gm3543D3Z235 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm3543D3Z235 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm3543D3Z235 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.71■□□□□ 0.59
Gm3543D3Z235 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm3543D3Z235 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Gm3543D3Z235 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.7■□□□□ 0.58
Gm3543D3Z235 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm3543D3Z235 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Gm3543D3Z235 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Gm3543D3Z235 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm3543D3Z235 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm3543D3Z235 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm3543D3Z235 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm3543D3Z235 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gm3543D3Z235 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.69■□□□□ 0.58
Gm3543D3Z235 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm3543D3Z235 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.69■□□□□ 0.58
Gm3543D3Z235 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.69■□□□□ 0.58
Gm3543D3Z235 Gm40881-201ENSMUST00000223397 166 ntBASIC18.69■□□□□ 0.58
Gm3543D3Z235 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm3543D3Z235 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gm3543D3Z235 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Gm3543D3Z235 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Gm3543D3Z235 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3543D3Z235 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.68■□□□□ 0.58
Gm3543D3Z235 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.68■□□□□ 0.58
Gm3543D3Z235 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Gm3543D3Z235 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3543D3Z235 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3543D3Z235 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.68■□□□□ 0.58
Gm3543D3Z235 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.68■□□□□ 0.58
Gm3543D3Z235 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3543D3Z235 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.68■□□□□ 0.58
Gm3543D3Z235 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3543D3Z235 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3543D3Z235 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3543D3Z235 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3543D3Z235 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3543D3Z235 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3543D3Z235 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3543D3Z235 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3543D3Z235 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3543D3Z235 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3543D3Z235 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3543D3Z235 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Gm3543D3Z235 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3543D3Z235 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm3543D3Z235 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm3543D3Z235 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm3543D3Z235 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Gm3543D3Z235 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gm3543D3Z235 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Gm3543D3Z235 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm3543D3Z235 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.64■□□□□ 0.57
Gm3543D3Z235 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.64■□□□□ 0.57
Gm3543D3Z235 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm3543D3Z235 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm3543D3Z235 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm3543D3Z235 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3543D3Z235 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.63■□□□□ 0.57
Gm3543D3Z235 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.63■□□□□ 0.57
Gm3543D3Z235 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3543D3Z235 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Gm3543D3Z235 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3543D3Z235 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3543D3Z235 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3543D3Z235 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3543D3Z235 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm3543D3Z235 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm3543D3Z235 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm3543D3Z235 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.62■□□□□ 0.57
Gm3543D3Z235 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm3543D3Z235 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm3543D3Z235 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms