Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Gm11599-201ENSMUST00000118720 878 ntBASIC23.8■■□□□ 1.4
Syce3B5KM66 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Syce3B5KM66 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Syce3B5KM66 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Syce3B5KM66 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Syce3B5KM66 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Syce3B5KM66 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Syce3B5KM66 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Syce3B5KM66 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
Syce3B5KM66 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Syce3B5KM66 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.79■■□□□ 1.4
Syce3B5KM66 Gm7432-201ENSMUST00000210343 879 ntBASIC23.79■■□□□ 1.4
Syce3B5KM66 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Syce3B5KM66 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Syce3B5KM66 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Syce3B5KM66 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Syce3B5KM66 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Syce3B5KM66 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Syce3B5KM66 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Syce3B5KM66 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Syce3B5KM66 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Syce3B5KM66 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Syce3B5KM66 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Syce3B5KM66 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC23.78■■□□□ 1.4
Syce3B5KM66 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Syce3B5KM66 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC23.78■■□□□ 1.4
Syce3B5KM66 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Syce3B5KM66 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Syce3B5KM66 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Syce3B5KM66 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Syce3B5KM66 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Syce3B5KM66 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Syce3B5KM66 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Syce3B5KM66 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Syce3B5KM66 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Syce3B5KM66 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Syce3B5KM66 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Syce3B5KM66 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Syce3B5KM66 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Syce3B5KM66 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Syce3B5KM66 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Syce3B5KM66 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Syce3B5KM66 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.76■■□□□ 1.39
Syce3B5KM66 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.76■■□□□ 1.39
Syce3B5KM66 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC23.76■■□□□ 1.39
Syce3B5KM66 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Syce3B5KM66 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Syce3B5KM66 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Syce3B5KM66 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Syce3B5KM66 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Syce3B5KM66 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Syce3B5KM66 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC23.74■■□□□ 1.39
Syce3B5KM66 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Syce3B5KM66 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Syce3B5KM66 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Syce3B5KM66 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Syce3B5KM66 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Syce3B5KM66 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC23.74■■□□□ 1.39
Syce3B5KM66 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Syce3B5KM66 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Syce3B5KM66 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Syce3B5KM66 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Syce3B5KM66 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Syce3B5KM66 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Syce3B5KM66 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Syce3B5KM66 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Syce3B5KM66 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Syce3B5KM66 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Syce3B5KM66 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Syce3B5KM66 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Syce3B5KM66 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Syce3B5KM66 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Syce3B5KM66 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Syce3B5KM66 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Syce3B5KM66 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Syce3B5KM66 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Syce3B5KM66 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Syce3B5KM66 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
Syce3B5KM66 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Syce3B5KM66 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Syce3B5KM66 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Syce3B5KM66 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.7■■□□□ 1.38
Syce3B5KM66 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Syce3B5KM66 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Syce3B5KM66 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Syce3B5KM66 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Syce3B5KM66 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC23.69■■□□□ 1.38
Syce3B5KM66 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Syce3B5KM66 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Syce3B5KM66 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Syce3B5KM66 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.69■■□□□ 1.38
Syce3B5KM66 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Syce3B5KM66 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Syce3B5KM66 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Syce3B5KM66 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Syce3B5KM66 Gm5913-201ENSMUST00000119397 1399 ntBASIC23.68■■□□□ 1.38
Syce3B5KM66 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC23.68■■□□□ 1.38
Syce3B5KM66 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Syce3B5KM66 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Syce3B5KM66 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.68■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms