Protein–RNA interactions for Protein: B1AY40

Ssxb8, MCG1044712, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssxb8B1AY40 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ssxb8B1AY40 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ssxb8B1AY40 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.11■□□□□ 0.81
Ssxb8B1AY40 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ssxb8B1AY40 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ssxb8B1AY40 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ssxb8B1AY40 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.1■□□□□ 0.81
Ssxb8B1AY40 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Ssxb8B1AY40 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.1■□□□□ 0.81
Ssxb8B1AY40 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Ssxb8B1AY40 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ssxb8B1AY40 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ssxb8B1AY40 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ssxb8B1AY40 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ssxb8B1AY40 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ssxb8B1AY40 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ssxb8B1AY40 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ssxb8B1AY40 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Ssxb8B1AY40 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ssxb8B1AY40 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ssxb8B1AY40 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ssxb8B1AY40 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
Ssxb8B1AY40 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ssxb8B1AY40 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ssxb8B1AY40 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ssxb8B1AY40 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Ssxb8B1AY40 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ssxb8B1AY40 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ssxb8B1AY40 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Ssxb8B1AY40 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Ssxb8B1AY40 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Ssxb8B1AY40 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ssxb8B1AY40 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.08■□□□□ 0.8
Ssxb8B1AY40 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.07■□□□□ 0.8
Ssxb8B1AY40 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ssxb8B1AY40 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Ssxb8B1AY40 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ssxb8B1AY40 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.06■□□□□ 0.8
Ssxb8B1AY40 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ssxb8B1AY40 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ssxb8B1AY40 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ssxb8B1AY40 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ssxb8B1AY40 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Ssxb8B1AY40 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ssxb8B1AY40 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ssxb8B1AY40 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ssxb8B1AY40 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
Ssxb8B1AY40 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ssxb8B1AY40 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ssxb8B1AY40 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ssxb8B1AY40 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ssxb8B1AY40 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ssxb8B1AY40 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.05■□□□□ 0.8
Ssxb8B1AY40 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ssxb8B1AY40 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ssxb8B1AY40 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ssxb8B1AY40 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ssxb8B1AY40 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ssxb8B1AY40 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ssxb8B1AY40 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ssxb8B1AY40 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ssxb8B1AY40 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ssxb8B1AY40 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ssxb8B1AY40 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ssxb8B1AY40 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Ssxb8B1AY40 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ssxb8B1AY40 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ssxb8B1AY40 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Ssxb8B1AY40 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ssxb8B1AY40 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ssxb8B1AY40 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Ssxb8B1AY40 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ssxb8B1AY40 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ssxb8B1AY40 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ssxb8B1AY40 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ssxb8B1AY40 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.03■□□□□ 0.8
Ssxb8B1AY40 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ssxb8B1AY40 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ssxb8B1AY40 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.03■□□□□ 0.8
Ssxb8B1AY40 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ssxb8B1AY40 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Ssxb8B1AY40 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ssxb8B1AY40 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ssxb8B1AY40 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ssxb8B1AY40 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ssxb8B1AY40 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Ssxb8B1AY40 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ssxb8B1AY40 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ssxb8B1AY40 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ssxb8B1AY40 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ssxb8B1AY40 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ssxb8B1AY40 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ssxb8B1AY40 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ssxb8B1AY40 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Ssxb8B1AY40 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20■□□□□ 0.79
Ssxb8B1AY40 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ssxb8B1AY40 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ssxb8B1AY40 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ssxb8B1AY40 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20■□□□□ 0.79
Ssxb8B1AY40 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms