Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Krt28A6BLY7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Krt28A6BLY7 Gm37179-201ENSMUST00000194862 823 ntBASIC23.38■■□□□ 1.33
Krt28A6BLY7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC23.38■■□□□ 1.33
Krt28A6BLY7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Krt28A6BLY7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Krt28A6BLY7 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Krt28A6BLY7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Krt28A6BLY7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Krt28A6BLY7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Krt28A6BLY7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Krt28A6BLY7 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC23.36■■□□□ 1.33
Krt28A6BLY7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Krt28A6BLY7 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Krt28A6BLY7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Krt28A6BLY7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC23.36■■□□□ 1.33
Krt28A6BLY7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC23.36■■□□□ 1.33
Krt28A6BLY7 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Krt28A6BLY7 Gm10849-201ENSMUST00000100397 618 ntBASIC23.35■■□□□ 1.33
Krt28A6BLY7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC23.35■■□□□ 1.33
Krt28A6BLY7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Krt28A6BLY7 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Krt28A6BLY7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Krt28A6BLY7 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Krt28A6BLY7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
Krt28A6BLY7 Gm6085-201ENSMUST00000182774 1470 ntBASIC23.35■■□□□ 1.33
Krt28A6BLY7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Krt28A6BLY7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.34■■□□□ 1.33
Krt28A6BLY7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC23.34■■□□□ 1.33
Krt28A6BLY7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Krt28A6BLY7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Krt28A6BLY7 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Krt28A6BLY7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Krt28A6BLY7 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Krt28A6BLY7 Gm27011-201ENSMUST00000182352 972 ntBASIC23.33■■□□□ 1.33
Krt28A6BLY7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC23.33■■□□□ 1.33
Krt28A6BLY7 CT025689.6-201ENSMUST00000224991 1104 ntBASIC23.33■■□□□ 1.33
Krt28A6BLY7 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Krt28A6BLY7 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Krt28A6BLY7 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Krt28A6BLY7 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Krt28A6BLY7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Krt28A6BLY7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
Krt28A6BLY7 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.32■■□□□ 1.32
Krt28A6BLY7 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Krt28A6BLY7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Krt28A6BLY7 Spcs1-204ENSMUST00000226782 949 ntBASIC23.32■■□□□ 1.32
Krt28A6BLY7 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Krt28A6BLY7 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Krt28A6BLY7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC23.32■■□□□ 1.32
Krt28A6BLY7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Krt28A6BLY7 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Krt28A6BLY7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC23.31■■□□□ 1.32
Krt28A6BLY7 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Krt28A6BLY7 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Krt28A6BLY7 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Krt28A6BLY7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC23.3■■□□□ 1.32
Krt28A6BLY7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Krt28A6BLY7 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Krt28A6BLY7 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Krt28A6BLY7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Krt28A6BLY7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Krt28A6BLY7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Krt28A6BLY7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Krt28A6BLY7 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Krt28A6BLY7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Krt28A6BLY7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Krt28A6BLY7 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Krt28A6BLY7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Krt28A6BLY7 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC23.28■■□□□ 1.32
Krt28A6BLY7 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Krt28A6BLY7 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Krt28A6BLY7 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Krt28A6BLY7 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Krt28A6BLY7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Krt28A6BLY7 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Krt28A6BLY7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Krt28A6BLY7 Gm10129-202ENSMUST00000193100 1316 ntBASIC23.27■■□□□ 1.32
Krt28A6BLY7 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Krt28A6BLY7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Krt28A6BLY7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Krt28A6BLY7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC23.26■■□□□ 1.31
Krt28A6BLY7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Krt28A6BLY7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Krt28A6BLY7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC23.26■■□□□ 1.31
Krt28A6BLY7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC23.26■■□□□ 1.31
Krt28A6BLY7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
Krt28A6BLY7 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Krt28A6BLY7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Krt28A6BLY7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Krt28A6BLY7 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Krt28A6BLY7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Krt28A6BLY7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Krt28A6BLY7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Krt28A6BLY7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Krt28A6BLY7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Krt28A6BLY7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC23.25■■□□□ 1.31
Krt28A6BLY7 Gm40848-201ENSMUST00000221998 324 ntBASIC23.25■■□□□ 1.31
Krt28A6BLY7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC23.25■■□□□ 1.31
Krt28A6BLY7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms