Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trbv5A0A0B4J1G9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trbv5A0A0B4J1G9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv5A0A0B4J1G9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv5A0A0B4J1G9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv5A0A0B4J1G9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv5A0A0B4J1G9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv5A0A0B4J1G9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trbv5A0A0B4J1G9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trbv5A0A0B4J1G9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv5A0A0B4J1G9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv5A0A0B4J1G9 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.67■□□□□ 0.26
Trbv5A0A0B4J1G9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv5A0A0B4J1G9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.66■□□□□ 0.26
Trbv5A0A0B4J1G9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv5A0A0B4J1G9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv5A0A0B4J1G9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv5A0A0B4J1G9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv5A0A0B4J1G9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv5A0A0B4J1G9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv5A0A0B4J1G9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv5A0A0B4J1G9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv5A0A0B4J1G9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv5A0A0B4J1G9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv5A0A0B4J1G9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv5A0A0B4J1G9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv5A0A0B4J1G9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trbv5A0A0B4J1G9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv5A0A0B4J1G9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv5A0A0B4J1G9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv5A0A0B4J1G9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.65■□□□□ 0.26
Trbv5A0A0B4J1G9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv5A0A0B4J1G9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv5A0A0B4J1G9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv5A0A0B4J1G9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trbv5A0A0B4J1G9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv5A0A0B4J1G9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv5A0A0B4J1G9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv5A0A0B4J1G9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.64■□□□□ 0.25
Trbv5A0A0B4J1G9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.64■□□□□ 0.25
Trbv5A0A0B4J1G9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC16.64■□□□□ 0.25
Trbv5A0A0B4J1G9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv5A0A0B4J1G9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv5A0A0B4J1G9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv5A0A0B4J1G9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv5A0A0B4J1G9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv5A0A0B4J1G9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv5A0A0B4J1G9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv5A0A0B4J1G9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16.63■□□□□ 0.25
Trbv5A0A0B4J1G9 Mir3960-201ENSMUST00000198213 73 ntBASIC16.63■□□□□ 0.25
Trbv5A0A0B4J1G9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv5A0A0B4J1G9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trbv5A0A0B4J1G9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv5A0A0B4J1G9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv5A0A0B4J1G9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv5A0A0B4J1G9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trbv5A0A0B4J1G9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC16.62■□□□□ 0.25
Trbv5A0A0B4J1G9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv5A0A0B4J1G9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv5A0A0B4J1G9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trbv5A0A0B4J1G9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv5A0A0B4J1G9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.62■□□□□ 0.25
Trbv5A0A0B4J1G9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv5A0A0B4J1G9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv5A0A0B4J1G9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv5A0A0B4J1G9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv5A0A0B4J1G9 Gm6821-201ENSMUST00000107540 542 ntBASIC16.61■□□□□ 0.25
Trbv5A0A0B4J1G9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.61■□□□□ 0.25
Trbv5A0A0B4J1G9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv5A0A0B4J1G9 Gm9939-201ENSMUST00000067161 1154 ntBASIC16.61■□□□□ 0.25
Trbv5A0A0B4J1G9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv5A0A0B4J1G9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv5A0A0B4J1G9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv5A0A0B4J1G9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv5A0A0B4J1G9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv5A0A0B4J1G9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv5A0A0B4J1G9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv5A0A0B4J1G9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trbv5A0A0B4J1G9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv5A0A0B4J1G9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trbv5A0A0B4J1G9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv5A0A0B4J1G9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv5A0A0B4J1G9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv5A0A0B4J1G9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv5A0A0B4J1G9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
Trbv5A0A0B4J1G9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Trbv5A0A0B4J1G9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trbv5A0A0B4J1G9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trbv5A0A0B4J1G9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv5A0A0B4J1G9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv5A0A0B4J1G9 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.57■□□□□ 0.24
Trbv5A0A0B4J1G9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv5A0A0B4J1G9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv5A0A0B4J1G9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv5A0A0B4J1G9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv5A0A0B4J1G9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv5A0A0B4J1G9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv5A0A0B4J1G9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC16.57■□□□□ 0.24
Trbv5A0A0B4J1G9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.57■□□□□ 0.24
Trbv5A0A0B4J1G9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms