Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.55■□□□□ 0.24
BC053393A0A0B4J1F6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
BC053393A0A0B4J1F6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BC053393A0A0B4J1F6 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
BC053393A0A0B4J1F6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BC053393A0A0B4J1F6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BC053393A0A0B4J1F6 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
BC053393A0A0B4J1F6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BC053393A0A0B4J1F6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
BC053393A0A0B4J1F6 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.54■□□□□ 0.24
BC053393A0A0B4J1F6 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
BC053393A0A0B4J1F6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BC053393A0A0B4J1F6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
BC053393A0A0B4J1F6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BC053393A0A0B4J1F6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
BC053393A0A0B4J1F6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.54■□□□□ 0.24
BC053393A0A0B4J1F6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
BC053393A0A0B4J1F6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.54■□□□□ 0.24
BC053393A0A0B4J1F6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BC053393A0A0B4J1F6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BC053393A0A0B4J1F6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.54■□□□□ 0.24
BC053393A0A0B4J1F6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
BC053393A0A0B4J1F6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
BC053393A0A0B4J1F6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.53■□□□□ 0.24
BC053393A0A0B4J1F6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.53■□□□□ 0.24
BC053393A0A0B4J1F6 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BC053393A0A0B4J1F6 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BC053393A0A0B4J1F6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
BC053393A0A0B4J1F6 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
BC053393A0A0B4J1F6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
BC053393A0A0B4J1F6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
BC053393A0A0B4J1F6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
BC053393A0A0B4J1F6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
BC053393A0A0B4J1F6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
BC053393A0A0B4J1F6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
BC053393A0A0B4J1F6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
BC053393A0A0B4J1F6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.23
BC053393A0A0B4J1F6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
BC053393A0A0B4J1F6 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
BC053393A0A0B4J1F6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
BC053393A0A0B4J1F6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
BC053393A0A0B4J1F6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
BC053393A0A0B4J1F6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
BC053393A0A0B4J1F6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BC053393A0A0B4J1F6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BC053393A0A0B4J1F6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
BC053393A0A0B4J1F6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
BC053393A0A0B4J1F6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
BC053393A0A0B4J1F6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
BC053393A0A0B4J1F6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BC053393A0A0B4J1F6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BC053393A0A0B4J1F6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BC053393A0A0B4J1F6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.51■□□□□ 0.23
BC053393A0A0B4J1F6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.51■□□□□ 0.23
BC053393A0A0B4J1F6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BC053393A0A0B4J1F6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BC053393A0A0B4J1F6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BC053393A0A0B4J1F6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BC053393A0A0B4J1F6 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.51■□□□□ 0.23
BC053393A0A0B4J1F6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BC053393A0A0B4J1F6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
BC053393A0A0B4J1F6 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BC053393A0A0B4J1F6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
BC053393A0A0B4J1F6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
BC053393A0A0B4J1F6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
BC053393A0A0B4J1F6 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
BC053393A0A0B4J1F6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BC053393A0A0B4J1F6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
BC053393A0A0B4J1F6 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BC053393A0A0B4J1F6 Gm14523-201ENSMUST00000117260 558 ntBASIC16.5■□□□□ 0.23
BC053393A0A0B4J1F6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BC053393A0A0B4J1F6 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BC053393A0A0B4J1F6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BC053393A0A0B4J1F6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BC053393A0A0B4J1F6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BC053393A0A0B4J1F6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BC053393A0A0B4J1F6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
BC053393A0A0B4J1F6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
BC053393A0A0B4J1F6 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BC053393A0A0B4J1F6 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BC053393A0A0B4J1F6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.49■□□□□ 0.23
BC053393A0A0B4J1F6 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BC053393A0A0B4J1F6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BC053393A0A0B4J1F6 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.49■□□□□ 0.23
BC053393A0A0B4J1F6 Gm7332-201ENSMUST00000118351 454 ntBASIC16.49■□□□□ 0.23
BC053393A0A0B4J1F6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.49■□□□□ 0.23
BC053393A0A0B4J1F6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BC053393A0A0B4J1F6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BC053393A0A0B4J1F6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BC053393A0A0B4J1F6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
BC053393A0A0B4J1F6 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BC053393A0A0B4J1F6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BC053393A0A0B4J1F6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BC053393A0A0B4J1F6 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
BC053393A0A0B4J1F6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.48■□□□□ 0.23
BC053393A0A0B4J1F6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BC053393A0A0B4J1F6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BC053393A0A0B4J1F6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BC053393A0A0B4J1F6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BC053393A0A0B4J1F6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms