Protein–RNA interactions for Protein: A0A087WR36

Vmn1r90, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r90A0A087WR36 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vmn1r90A0A087WR36 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vmn1r90A0A087WR36 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vmn1r90A0A087WR36 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
Vmn1r90A0A087WR36 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.74■□□□□ 0.75
Vmn1r90A0A087WR36 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Vmn1r90A0A087WR36 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Vmn1r90A0A087WR36 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Vmn1r90A0A087WR36 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vmn1r90A0A087WR36 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vmn1r90A0A087WR36 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vmn1r90A0A087WR36 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vmn1r90A0A087WR36 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vmn1r90A0A087WR36 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vmn1r90A0A087WR36 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vmn1r90A0A087WR36 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vmn1r90A0A087WR36 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vmn1r90A0A087WR36 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vmn1r90A0A087WR36 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vmn1r90A0A087WR36 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vmn1r90A0A087WR36 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.72■□□□□ 0.75
Vmn1r90A0A087WR36 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vmn1r90A0A087WR36 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vmn1r90A0A087WR36 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Vmn1r90A0A087WR36 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.71■□□□□ 0.75
Vmn1r90A0A087WR36 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.71■□□□□ 0.75
Vmn1r90A0A087WR36 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.71■□□□□ 0.75
Vmn1r90A0A087WR36 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.71■□□□□ 0.75
Vmn1r90A0A087WR36 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.71■□□□□ 0.75
Vmn1r90A0A087WR36 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vmn1r90A0A087WR36 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vmn1r90A0A087WR36 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vmn1r90A0A087WR36 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vmn1r90A0A087WR36 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vmn1r90A0A087WR36 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vmn1r90A0A087WR36 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.7■□□□□ 0.74
Vmn1r90A0A087WR36 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.69■□□□□ 0.74
Vmn1r90A0A087WR36 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.69■□□□□ 0.74
Vmn1r90A0A087WR36 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vmn1r90A0A087WR36 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Vmn1r90A0A087WR36 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vmn1r90A0A087WR36 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vmn1r90A0A087WR36 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vmn1r90A0A087WR36 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vmn1r90A0A087WR36 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vmn1r90A0A087WR36 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vmn1r90A0A087WR36 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vmn1r90A0A087WR36 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.68■□□□□ 0.74
Vmn1r90A0A087WR36 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vmn1r90A0A087WR36 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vmn1r90A0A087WR36 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vmn1r90A0A087WR36 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Vmn1r90A0A087WR36 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vmn1r90A0A087WR36 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Vmn1r90A0A087WR36 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vmn1r90A0A087WR36 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vmn1r90A0A087WR36 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vmn1r90A0A087WR36 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vmn1r90A0A087WR36 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vmn1r90A0A087WR36 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vmn1r90A0A087WR36 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vmn1r90A0A087WR36 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vmn1r90A0A087WR36 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vmn1r90A0A087WR36 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vmn1r90A0A087WR36 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Vmn1r90A0A087WR36 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.66■□□□□ 0.74
Vmn1r90A0A087WR36 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Vmn1r90A0A087WR36 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vmn1r90A0A087WR36 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vmn1r90A0A087WR36 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vmn1r90A0A087WR36 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vmn1r90A0A087WR36 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vmn1r90A0A087WR36 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vmn1r90A0A087WR36 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vmn1r90A0A087WR36 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Vmn1r90A0A087WR36 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Vmn1r90A0A087WR36 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Vmn1r90A0A087WR36 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Vmn1r90A0A087WR36 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Vmn1r90A0A087WR36 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Vmn1r90A0A087WR36 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Vmn1r90A0A087WR36 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vmn1r90A0A087WR36 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vmn1r90A0A087WR36 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vmn1r90A0A087WR36 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vmn1r90A0A087WR36 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vmn1r90A0A087WR36 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Vmn1r90A0A087WR36 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vmn1r90A0A087WR36 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vmn1r90A0A087WR36 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.62■□□□□ 0.73
Vmn1r90A0A087WR36 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vmn1r90A0A087WR36 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vmn1r90A0A087WR36 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vmn1r90A0A087WR36 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.62■□□□□ 0.73
Vmn1r90A0A087WR36 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vmn1r90A0A087WR36 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.62■□□□□ 0.73
Vmn1r90A0A087WR36 Gm22238-201ENSMUST00000175222 88 ntBASIC19.62■□□□□ 0.73
Vmn1r90A0A087WR36 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.62■□□□□ 0.73
Vmn1r90A0A087WR36 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vmn1r90A0A087WR36 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms