Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-4A0A075B654 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-4A0A075B654 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-4A0A075B654 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-4A0A075B654 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-4A0A075B654 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-4A0A075B654 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Trav3-4A0A075B654 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-4A0A075B654 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-4A0A075B654 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-4A0A075B654 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-4A0A075B654 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-4A0A075B654 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-4A0A075B654 Gm8109-201ENSMUST00000194076 746 ntBASIC13.94□□□□□ -0.18
Trav3-4A0A075B654 AC115037.1-201ENSMUST00000223391 2173 ntBASIC13.94□□□□□ -0.18
Trav3-4A0A075B654 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-4A0A075B654 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-4A0A075B654 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Trav3-4A0A075B654 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-4A0A075B654 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-4A0A075B654 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3-4A0A075B654 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav3-4A0A075B654 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3-4A0A075B654 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3-4A0A075B654 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3-4A0A075B654 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC13.93□□□□□ -0.18
Trav3-4A0A075B654 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav3-4A0A075B654 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3-4A0A075B654 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3-4A0A075B654 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3-4A0A075B654 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trav3-4A0A075B654 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC13.92□□□□□ -0.18
Trav3-4A0A075B654 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3-4A0A075B654 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Trav3-4A0A075B654 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav3-4A0A075B654 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3-4A0A075B654 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3-4A0A075B654 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav3-4A0A075B654 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3-4A0A075B654 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3-4A0A075B654 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3-4A0A075B654 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3-4A0A075B654 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3-4A0A075B654 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Trav3-4A0A075B654 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3-4A0A075B654 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-4A0A075B654 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-4A0A075B654 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-4A0A075B654 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-4A0A075B654 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-4A0A075B654 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-4A0A075B654 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-4A0A075B654 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-4A0A075B654 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-4A0A075B654 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Trav3-4A0A075B654 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav3-4A0A075B654 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-4A0A075B654 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-4A0A075B654 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-4A0A075B654 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-4A0A075B654 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-4A0A075B654 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-4A0A075B654 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav3-4A0A075B654 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-4A0A075B654 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-4A0A075B654 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav3-4A0A075B654 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-4A0A075B654 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav3-4A0A075B654 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-4A0A075B654 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-4A0A075B654 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-4A0A075B654 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-4A0A075B654 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav3-4A0A075B654 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav3-4A0A075B654 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-4A0A075B654 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-4A0A075B654 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav3-4A0A075B654 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav3-4A0A075B654 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-4A0A075B654 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-4A0A075B654 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-4A0A075B654 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-4A0A075B654 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav3-4A0A075B654 Gm42418-201ENSMUST00000182010 1831 ntBASIC13.88□□□□□ -0.19
Trav3-4A0A075B654 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-4A0A075B654 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav3-4A0A075B654 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
Trav3-4A0A075B654 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
Trav3-4A0A075B654 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav3-4A0A075B654 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav3-4A0A075B654 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav3-4A0A075B654 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-4A0A075B654 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-4A0A075B654 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav3-4A0A075B654 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3-4A0A075B654 Gm34220-201ENSMUST00000223001 2709 ntBASIC13.87□□□□□ -0.19
Trav3-4A0A075B654 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3-4A0A075B654 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3-4A0A075B654 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3-4A0A075B654 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms