Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.97■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.97■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.97■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.97■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.95■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.93■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.93■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.91■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Gm11687-201ENSMUST00000118911 886 ntBASIC16.91■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.9■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav15-2-dv6-2A0A075B650 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav15-2-dv6-2A0A075B650 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav15-2-dv6-2A0A075B650 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav15-2-dv6-2A0A075B650 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Trav15-2-dv6-2A0A075B650 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav15-2-dv6-2A0A075B650 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trav15-2-dv6-2A0A075B650 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav15-2-dv6-2A0A075B650 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav15-2-dv6-2A0A075B650 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav15-2-dv6-2A0A075B650 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav15-2-dv6-2A0A075B650 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav15-2-dv6-2A0A075B650 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav15-2-dv6-2A0A075B650 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav15-2-dv6-2A0A075B650 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms