Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav6-7-dv9A0A075B639 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav6-7-dv9A0A075B639 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav6-7-dv9A0A075B639 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.45■□□□□ 0.54
Trav6-7-dv9A0A075B639 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav6-7-dv9A0A075B639 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.45■□□□□ 0.54
Trav6-7-dv9A0A075B639 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav6-7-dv9A0A075B639 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav6-7-dv9A0A075B639 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trav6-7-dv9A0A075B639 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav6-7-dv9A0A075B639 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav6-7-dv9A0A075B639 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav6-7-dv9A0A075B639 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6-7-dv9A0A075B639 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.43■□□□□ 0.54
Trav6-7-dv9A0A075B639 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.43■□□□□ 0.54
Trav6-7-dv9A0A075B639 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6-7-dv9A0A075B639 Gm5921-201ENSMUST00000075898 882 ntBASIC18.43■□□□□ 0.54
Trav6-7-dv9A0A075B639 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6-7-dv9A0A075B639 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6-7-dv9A0A075B639 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6-7-dv9A0A075B639 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6-7-dv9A0A075B639 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6-7-dv9A0A075B639 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6-7-dv9A0A075B639 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6-7-dv9A0A075B639 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6-7-dv9A0A075B639 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6-7-dv9A0A075B639 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav6-7-dv9A0A075B639 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav6-7-dv9A0A075B639 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.42■□□□□ 0.54
Trav6-7-dv9A0A075B639 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Trav6-7-dv9A0A075B639 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trav6-7-dv9A0A075B639 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Trav6-7-dv9A0A075B639 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav6-7-dv9A0A075B639 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.42■□□□□ 0.54
Trav6-7-dv9A0A075B639 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trav6-7-dv9A0A075B639 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav6-7-dv9A0A075B639 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trav6-7-dv9A0A075B639 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav6-7-dv9A0A075B639 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Trav6-7-dv9A0A075B639 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav6-7-dv9A0A075B639 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.41■□□□□ 0.54
Trav6-7-dv9A0A075B639 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trav6-7-dv9A0A075B639 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.41■□□□□ 0.54
Trav6-7-dv9A0A075B639 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.41■□□□□ 0.54
Trav6-7-dv9A0A075B639 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav6-7-dv9A0A075B639 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav6-7-dv9A0A075B639 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav6-7-dv9A0A075B639 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav6-7-dv9A0A075B639 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav6-7-dv9A0A075B639 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav6-7-dv9A0A075B639 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.4■□□□□ 0.54
Trav6-7-dv9A0A075B639 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav6-7-dv9A0A075B639 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trav6-7-dv9A0A075B639 Gm43566-201ENSMUST00000196851 808 ntBASIC18.4■□□□□ 0.54
Trav6-7-dv9A0A075B639 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav6-7-dv9A0A075B639 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav6-7-dv9A0A075B639 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav6-7-dv9A0A075B639 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Trav6-7-dv9A0A075B639 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav6-7-dv9A0A075B639 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav6-7-dv9A0A075B639 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Trav6-7-dv9A0A075B639 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Trav6-7-dv9A0A075B639 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav6-7-dv9A0A075B639 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trav6-7-dv9A0A075B639 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav6-7-dv9A0A075B639 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trav6-7-dv9A0A075B639 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav6-7-dv9A0A075B639 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav6-7-dv9A0A075B639 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav6-7-dv9A0A075B639 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trav6-7-dv9A0A075B639 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav6-7-dv9A0A075B639 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6-7-dv9A0A075B639 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6-7-dv9A0A075B639 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6-7-dv9A0A075B639 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Trav6-7-dv9A0A075B639 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6-7-dv9A0A075B639 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.37■□□□□ 0.53
Trav6-7-dv9A0A075B639 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.37■□□□□ 0.53
Trav6-7-dv9A0A075B639 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Trav6-7-dv9A0A075B639 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6-7-dv9A0A075B639 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6-7-dv9A0A075B639 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.36■□□□□ 0.53
Trav6-7-dv9A0A075B639 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trav6-7-dv9A0A075B639 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trav6-7-dv9A0A075B639 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav6-7-dv9A0A075B639 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav6-7-dv9A0A075B639 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav6-7-dv9A0A075B639 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav6-7-dv9A0A075B639 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav6-7-dv9A0A075B639 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trav6-7-dv9A0A075B639 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6-7-dv9A0A075B639 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6-7-dv9A0A075B639 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trav6-7-dv9A0A075B639 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.35■□□□□ 0.53
Trav6-7-dv9A0A075B639 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6-7-dv9A0A075B639 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.35■□□□□ 0.53
Trav6-7-dv9A0A075B639 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6-7-dv9A0A075B639 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6-7-dv9A0A075B639 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6-7-dv9A0A075B639 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms