Protein–RNA interactions for Protein: A0A075B5W5

Ighv1-54, Immunoglobulin heavy variable V1-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-54A0A075B5W5 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-54A0A075B5W5 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-54A0A075B5W5 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-54A0A075B5W5 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Ighv1-54A0A075B5W5 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ighv1-54A0A075B5W5 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Ighv1-54A0A075B5W5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-54A0A075B5W5 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-54A0A075B5W5 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-54A0A075B5W5 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-54A0A075B5W5 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-54A0A075B5W5 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ighv1-54A0A075B5W5 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.61■□□□□ 0.57
Ighv1-54A0A075B5W5 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-54A0A075B5W5 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.61■□□□□ 0.57
Ighv1-54A0A075B5W5 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-54A0A075B5W5 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.61■□□□□ 0.57
Ighv1-54A0A075B5W5 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv1-54A0A075B5W5 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.6■□□□□ 0.57
Ighv1-54A0A075B5W5 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.6■□□□□ 0.57
Ighv1-54A0A075B5W5 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv1-54A0A075B5W5 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-54A0A075B5W5 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.59■□□□□ 0.57
Ighv1-54A0A075B5W5 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-54A0A075B5W5 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-54A0A075B5W5 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-54A0A075B5W5 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ighv1-54A0A075B5W5 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ighv1-54A0A075B5W5 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ighv1-54A0A075B5W5 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ighv1-54A0A075B5W5 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ighv1-54A0A075B5W5 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ighv1-54A0A075B5W5 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.58■□□□□ 0.56
Ighv1-54A0A075B5W5 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.58■□□□□ 0.56
Ighv1-54A0A075B5W5 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ighv1-54A0A075B5W5 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ighv1-54A0A075B5W5 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ighv1-54A0A075B5W5 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ighv1-54A0A075B5W5 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ighv1-54A0A075B5W5 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ighv1-54A0A075B5W5 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ighv1-54A0A075B5W5 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-54A0A075B5W5 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-54A0A075B5W5 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-54A0A075B5W5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ighv1-54A0A075B5W5 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.57■□□□□ 0.56
Ighv1-54A0A075B5W5 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.57■□□□□ 0.56
Ighv1-54A0A075B5W5 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Ighv1-54A0A075B5W5 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-54A0A075B5W5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-54A0A075B5W5 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.57■□□□□ 0.56
Ighv1-54A0A075B5W5 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-54A0A075B5W5 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-54A0A075B5W5 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-54A0A075B5W5 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-54A0A075B5W5 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-54A0A075B5W5 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-54A0A075B5W5 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.56■□□□□ 0.56
Ighv1-54A0A075B5W5 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.56■□□□□ 0.56
Ighv1-54A0A075B5W5 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-54A0A075B5W5 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv1-54A0A075B5W5 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.55■□□□□ 0.56
Ighv1-54A0A075B5W5 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv1-54A0A075B5W5 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv1-54A0A075B5W5 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv1-54A0A075B5W5 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv1-54A0A075B5W5 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.54■□□□□ 0.56
Ighv1-54A0A075B5W5 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.54■□□□□ 0.56
Ighv1-54A0A075B5W5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Ighv1-54A0A075B5W5 Gm9959-201ENSMUST00000068277 390 ntBASIC18.54■□□□□ 0.56
Ighv1-54A0A075B5W5 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv1-54A0A075B5W5 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.54■□□□□ 0.56
Ighv1-54A0A075B5W5 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.54■□□□□ 0.56
Ighv1-54A0A075B5W5 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ighv1-54A0A075B5W5 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.54■□□□□ 0.56
Ighv1-54A0A075B5W5 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv1-54A0A075B5W5 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv1-54A0A075B5W5 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv1-54A0A075B5W5 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv1-54A0A075B5W5 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv1-54A0A075B5W5 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv1-54A0A075B5W5 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.53■□□□□ 0.56
Ighv1-54A0A075B5W5 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Ighv1-54A0A075B5W5 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Ighv1-54A0A075B5W5 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv1-54A0A075B5W5 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ighv1-54A0A075B5W5 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
Ighv1-54A0A075B5W5 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ighv1-54A0A075B5W5 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ighv1-54A0A075B5W5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.52■□□□□ 0.56
Ighv1-54A0A075B5W5 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.52■□□□□ 0.56
Ighv1-54A0A075B5W5 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.55
Ighv1-54A0A075B5W5 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ighv1-54A0A075B5W5 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.51■□□□□ 0.55
Ighv1-54A0A075B5W5 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv1-54A0A075B5W5 Etf1-202ENSMUST00000180351 108 ntBASIC18.51■□□□□ 0.55
Ighv1-54A0A075B5W5 Gm7417-201ENSMUST00000192950 473 ntBASIC18.51■□□□□ 0.55
Ighv1-54A0A075B5W5 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv1-54A0A075B5W5 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv1-54A0A075B5W5 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms