Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Gm38317-201ENSMUST00000195564 343 ntBASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Gm14999-201ENSMUST00000121039 624 ntBASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Gm15276-201ENSMUST00000145953 498 ntBASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Gm27046-201ENSMUST00000182160 463 ntBASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Gm3096-201ENSMUST00000185770 364 ntBASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Gm29199-201ENSMUST00000187766 775 ntBASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Gm8885-201ENSMUST00000189382 598 ntBASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Gm39404-201ENSMUST00000216350 313 ntBASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clcf1Q9QZM3 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Gm12314-201ENSMUST00000118104 538 ntBASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms