Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Gm24231-201ENSMUST00000104315 133 ntBASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Gm6023-201ENSMUST00000118217 606 ntBASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Mir8109-201ENSMUST00000184375 117 ntBASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Gm6013-201ENSMUST00000212264 699 ntBASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a2Q9JLR1 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Daam2-202ENSMUST00000224595 1926 ntBASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a2Q9JLR1 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms