Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Gm13296-201ENSMUST00000117854 997 ntBASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Gm5419-201ENSMUST00000119301 527 ntBASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Gm12036-201ENSMUST00000120008 530 ntBASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Gm26083-201ENSMUST00000157904 193 ntBASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Gm18893-201ENSMUST00000198416 943 ntBASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.75□□□□□ -0.53
Upk3aQ9JKX8 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Gm35960-201ENSMUST00000202712 767 ntBASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Gm5455-201ENSMUST00000058710 715 ntBASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3aQ9JKX8 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms