Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Gm6023-201ENSMUST00000118217 606 ntBASIC14.28□□□□□ -0.12
Ccdc7Q9D541 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.28□□□□□ -0.12
Ccdc7Q9D541 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc7Q9D541 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc7Q9D541 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
Ccdc7Q9D541 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.28□□□□□ -0.12
Ccdc7Q9D541 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc7Q9D541 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc7Q9D541 Gm5950-201ENSMUST00000213337 772 ntBASIC14.28□□□□□ -0.12
Ccdc7Q9D541 Gm19309-201ENSMUST00000218295 205 ntBASIC14.28□□□□□ -0.12
Ccdc7Q9D541 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.28□□□□□ -0.12
Ccdc7Q9D541 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Ccdc7Q9D541 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc7Q9D541 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc7Q9D541 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc7Q9D541 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc7Q9D541 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc7Q9D541 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc7Q9D541 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc7Q9D541 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc7Q9D541 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc7Q9D541 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc7Q9D541 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc7Q9D541 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.27□□□□□ -0.12
Ccdc7Q9D541 AC126257.2-201ENSMUST00000215507 2300 ntBASIC14.27□□□□□ -0.12
Ccdc7Q9D541 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ccdc7Q9D541 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc7Q9D541 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.12
Ccdc7Q9D541 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc7Q9D541 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc7Q9D541 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC14.27□□□□□ -0.12
Ccdc7Q9D541 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc7Q9D541 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc7Q9D541 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc7Q9D541 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc7Q9D541 Gm10434-201ENSMUST00000101158 471 ntBASIC14.27□□□□□ -0.13
Ccdc7Q9D541 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc7Q9D541 Snora78-201ENSMUST00000158630 128 ntBASIC14.27□□□□□ -0.13
Ccdc7Q9D541 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccdc7Q9D541 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC14.27□□□□□ -0.13
Ccdc7Q9D541 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC14.27□□□□□ -0.13
Ccdc7Q9D541 AC153929.1-201ENSMUST00000219009 303 ntBASIC14.27□□□□□ -0.13
Ccdc7Q9D541 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccdc7Q9D541 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccdc7Q9D541 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.27□□□□□ -0.13
Ccdc7Q9D541 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.27□□□□□ -0.13
Ccdc7Q9D541 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc7Q9D541 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc7Q9D541 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ccdc7Q9D541 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc7Q9D541 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc7Q9D541 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc7Q9D541 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc7Q9D541 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc7Q9D541 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc7Q9D541 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc7Q9D541 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc7Q9D541 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc7Q9D541 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc7Q9D541 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc7Q9D541 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc7Q9D541 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc7Q9D541 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Gm8155-201ENSMUST00000216363 1612 ntBASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Gm25214-201ENSMUST00000104573 129 ntBASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Gm13829-201ENSMUST00000119600 138 ntBASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.26□□□□□ -0.13
Ccdc7Q9D541 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.26□□□□□ -0.13
Ccdc7Q9D541 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Gm42627-201ENSMUST00000197347 224 ntBASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Gm9996-201ENSMUST00000070359 913 ntBASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Gm2238-201ENSMUST00000192074 3669 ntBASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Gm44152-201ENSMUST00000205007 1691 ntBASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Gm43773-201ENSMUST00000198548 2162 ntBASIC14.26□□□□□ -0.13
Ccdc7Q9D541 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc7Q9D541 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms