Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 Gm17796-201ENSMUST00000189015 1213 ntBASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Col25a1Q99MQ5 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col25a1Q99MQ5 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col25a1Q99MQ5 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Col25a1Q99MQ5 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col25a1Q99MQ5 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.71□□□□□ -0.38
Col25a1Q99MQ5 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col25a1Q99MQ5 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col25a1Q99MQ5 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col25a1Q99MQ5 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Col25a1Q99MQ5 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col25a1Q99MQ5 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Gm13916-201ENSMUST00000117368 628 ntBASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Gm11578-201ENSMUST00000118530 459 ntBASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Gm14234-201ENSMUST00000119539 845 ntBASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Gm8199-201ENSMUST00000121323 823 ntBASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Gm24943-201ENSMUST00000158329 433 ntBASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Gm8723-201ENSMUST00000166076 820 ntBASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Gm8701-201ENSMUST00000169259 874 ntBASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Gm20414-201ENSMUST00000172918 646 ntBASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Mir8115-201ENSMUST00000184992 119 ntBASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.7□□□□□ -0.38
Col25a1Q99MQ5 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Gm38344-201ENSMUST00000195306 1353 ntBASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Gm13624-201ENSMUST00000120263 462 ntBASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms