Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Gm11989-201ENSMUST00000117240 672 ntBASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Gm14028-201ENSMUST00000117434 479 ntBASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Gm11362-201ENSMUST00000118838 850 ntBASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd3Q99LE3 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd3Q99LE3 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd3Q99LE3 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd3Q99LE3 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Lysmd3Q99LE3 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd3Q99LE3 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd3Q99LE3 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Lysmd3Q99LE3 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.71□□□□□ -0.37
Lysmd3Q99LE3 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Lysmd3Q99LE3 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Lysmd3Q99LE3 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.71□□□□□ -0.37
Lysmd3Q99LE3 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd3Q99LE3 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Lysmd3Q99LE3 Gm24749-201ENSMUST00000157838 343 ntBASIC12.71□□□□□ -0.37
Lysmd3Q99LE3 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd3Q99LE3 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.71□□□□□ -0.37
Lysmd3Q99LE3 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.71□□□□□ -0.37
Lysmd3Q99LE3 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.71□□□□□ -0.37
Lysmd3Q99LE3 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd3Q99LE3 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd3Q99LE3 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd3Q99LE3 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd3Q99LE3 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd3Q99LE3 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd3Q99LE3 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.71□□□□□ -0.37
Lysmd3Q99LE3 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.71□□□□□ -0.38
Lysmd3Q99LE3 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lysmd3Q99LE3 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lysmd3Q99LE3 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Lysmd3Q99LE3 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Lysmd3Q99LE3 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lysmd3Q99LE3 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Lysmd3Q99LE3 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lysmd3Q99LE3 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lysmd3Q99LE3 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms