Protein–RNA interactions for Protein: Q99KG7

Hps4, Hermansky-Pudlak syndrome 4 protein homolog, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps4Q99KG7 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps4Q99KG7 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps4Q99KG7 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hps4Q99KG7 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Hps4Q99KG7 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps4Q99KG7 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps4Q99KG7 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.35□□□□□ -0.11
Hps4Q99KG7 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps4Q99KG7 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps4Q99KG7 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps4Q99KG7 Gm24891-201ENSMUST00000104391 136 ntBASIC14.35□□□□□ -0.11
Hps4Q99KG7 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hps4Q99KG7 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hps4Q99KG7 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Hps4Q99KG7 Gm14724-201ENSMUST00000118400 537 ntBASIC14.35□□□□□ -0.11
Hps4Q99KG7 Gm14247-201ENSMUST00000120950 237 ntBASIC14.35□□□□□ -0.11
Hps4Q99KG7 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC14.35□□□□□ -0.11
Hps4Q99KG7 Gm28686-201ENSMUST00000187404 609 ntBASIC14.35□□□□□ -0.11
Hps4Q99KG7 Gm8956-201ENSMUST00000203939 825 ntBASIC14.35□□□□□ -0.11
Hps4Q99KG7 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC14.35□□□□□ -0.11
Hps4Q99KG7 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC14.35□□□□□ -0.11
Hps4Q99KG7 AC121960.1-201ENSMUST00000227982 564 ntBASIC14.35□□□□□ -0.11
Hps4Q99KG7 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps4Q99KG7 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hps4Q99KG7 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hps4Q99KG7 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hps4Q99KG7 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
Hps4Q99KG7 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps4Q99KG7 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hps4Q99KG7 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps4Q99KG7 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Hps4Q99KG7 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps4Q99KG7 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps4Q99KG7 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hps4Q99KG7 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps4Q99KG7 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps4Q99KG7 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps4Q99KG7 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hps4Q99KG7 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hps4Q99KG7 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps4Q99KG7 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps4Q99KG7 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps4Q99KG7 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps4Q99KG7 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC14.34□□□□□ -0.11
Hps4Q99KG7 Gm9630-201ENSMUST00000178304 885 ntBASIC14.34□□□□□ -0.11
Hps4Q99KG7 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC14.34□□□□□ -0.11
Hps4Q99KG7 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.34□□□□□ -0.11
Hps4Q99KG7 Gm37835-201ENSMUST00000193305 361 ntBASIC14.34□□□□□ -0.11
Hps4Q99KG7 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps4Q99KG7 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps4Q99KG7 Ginm1-202ENSMUST00000065124 300 ntBASIC14.34□□□□□ -0.11
Hps4Q99KG7 Gm10288-201ENSMUST00000084614 537 ntBASIC14.34□□□□□ -0.11
Hps4Q99KG7 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hps4Q99KG7 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.34□□□□□ -0.11
Hps4Q99KG7 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps4Q99KG7 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.34□□□□□ -0.11
Hps4Q99KG7 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps4Q99KG7 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps4Q99KG7 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps4Q99KG7 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hps4Q99KG7 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps4Q99KG7 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Hps4Q99KG7 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.34□□□□□ -0.11
Hps4Q99KG7 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hps4Q99KG7 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps4Q99KG7 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.34□□□□□ -0.11
Hps4Q99KG7 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hps4Q99KG7 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps4Q99KG7 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hps4Q99KG7 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Hps4Q99KG7 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hps4Q99KG7 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.33□□□□□ -0.11
Hps4Q99KG7 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Hps4Q99KG7 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Hps4Q99KG7 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.33□□□□□ -0.11
Hps4Q99KG7 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hps4Q99KG7 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hps4Q99KG7 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.33□□□□□ -0.12
Hps4Q99KG7 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Hps4Q99KG7 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hps4Q99KG7 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Hps4Q99KG7 AC173482.6-201ENSMUST00000225889 1741 ntBASIC14.33□□□□□ -0.12
Hps4Q99KG7 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hps4Q99KG7 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Hps4Q99KG7 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.33□□□□□ -0.12
Hps4Q99KG7 Gm8566-201ENSMUST00000120174 465 ntBASIC14.33□□□□□ -0.12
Hps4Q99KG7 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC14.33□□□□□ -0.12
Hps4Q99KG7 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hps4Q99KG7 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hps4Q99KG7 Gm37319-201ENSMUST00000193500 636 ntBASIC14.33□□□□□ -0.12
Hps4Q99KG7 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.33□□□□□ -0.12
Hps4Q99KG7 Gm2965-201ENSMUST00000198365 343 ntBASIC14.33□□□□□ -0.12
Hps4Q99KG7 Gm6905-201ENSMUST00000205729 511 ntBASIC14.33□□□□□ -0.12
Hps4Q99KG7 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hps4Q99KG7 Gm9797-202ENSMUST00000218003 294 ntBASIC14.33□□□□□ -0.12
Hps4Q99KG7 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hps4Q99KG7 AC154849.4-201ENSMUST00000224868 365 ntBASIC14.33□□□□□ -0.12
Hps4Q99KG7 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hps4Q99KG7 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hps4Q99KG7 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms