Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb2Q91Y00 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb2Q91Y00 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Gm12015-201ENSMUST00000117065 843 ntBASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Gm14130-201ENSMUST00000118417 987 ntBASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Gm9230-201ENSMUST00000188228 532 ntBASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb2Q91Y00 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Pcdhb2Q91Y00 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb2Q91Y00 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb2Q91Y00 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.02□□□□□ -0.32
Pcdhb2Q91Y00 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb2Q91Y00 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Pcdhb2Q91Y00 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb2Q91Y00 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb2Q91Y00 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Pcdhb2Q91Y00 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb2Q91Y00 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhb2Q91Y00 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb2Q91Y00 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Pcdhb2Q91Y00 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb2Q91Y00 Gm6963-201ENSMUST00000147879 379 ntBASIC13.02□□□□□ -0.33
Pcdhb2Q91Y00 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhb2Q91Y00 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC13.02□□□□□ -0.33
Pcdhb2Q91Y00 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb2Q91Y00 Rprl1-202ENSMUST00000198476 238 ntBASIC13.02□□□□□ -0.33
Pcdhb2Q91Y00 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.02□□□□□ -0.33
Pcdhb2Q91Y00 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb2Q91Y00 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.02□□□□□ -0.33
Pcdhb2Q91Y00 Gm45878-201ENSMUST00000211839 241 ntBASIC13.02□□□□□ -0.33
Pcdhb2Q91Y00 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhb2Q91Y00 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhb2Q91Y00 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb2Q91Y00 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb2Q91Y00 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhb2Q91Y00 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb2Q91Y00 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb2Q91Y00 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb2Q91Y00 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb2Q91Y00 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Pcdhb2Q91Y00 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb2Q91Y00 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb2Q91Y00 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb2Q91Y00 Gm26684-202ENSMUST00000228229 8257 ntBASIC13.02□□□□□ -0.33
Pcdhb2Q91Y00 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb2Q91Y00 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb2Q91Y00 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb2Q91Y00 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.01□□□□□ -0.33
Pcdhb2Q91Y00 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb2Q91Y00 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb2Q91Y00 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhb2Q91Y00 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb2Q91Y00 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb2Q91Y00 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb2Q91Y00 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhb2Q91Y00 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb2Q91Y00 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb2Q91Y00 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb2Q91Y00 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdhb2Q91Y00 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb2Q91Y00 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb2Q91Y00 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms