Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm12403-201ENSMUST00000121384 959 ntBASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Gm15376-201ENSMUST00000122258 783 ntBASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Gm15429-201ENSMUST00000151268 798 ntBASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Gm8463-201ENSMUST00000208573 613 ntBASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 AC132384.10-201ENSMUST00000217862 1204 ntBASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 AC158595.1-201ENSMUST00000217989 1435 ntBASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Gm18871-201ENSMUST00000218655 745 ntBASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 AC153512.2-201ENSMUST00000220363 1273 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb3Q91XZ7 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms