Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Gm45550-201ENSMUST00000209380 946 ntBASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Gm12165-201ENSMUST00000117047 342 ntBASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Gm14460-201ENSMUST00000121511 639 ntBASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Gm10051-201ENSMUST00000145209 414 ntBASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Gm28071-201ENSMUST00000190355 478 ntBASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 AY036118-201ENSMUST00000200021 923 ntBASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga6Q91XY2 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms