Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp3Q91W36 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
Usp3Q91W36 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Usp3Q91W36 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Usp3Q91W36 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Usp3Q91W36 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp3Q91W36 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Usp3Q91W36 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp3Q91W36 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.71□□□□□ -0.37
Usp3Q91W36 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp3Q91W36 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Usp3Q91W36 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.71□□□□□ -0.37
Usp3Q91W36 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp3Q91W36 Gm11652-201ENSMUST00000117842 1267 ntBASIC12.71□□□□□ -0.37
Usp3Q91W36 Gm13059-201ENSMUST00000119881 398 ntBASIC12.71□□□□□ -0.37
Usp3Q91W36 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Usp3Q91W36 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.71□□□□□ -0.37
Usp3Q91W36 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp3Q91W36 Gm19187-201ENSMUST00000206781 892 ntBASIC12.71□□□□□ -0.37
Usp3Q91W36 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.71□□□□□ -0.37
Usp3Q91W36 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp3Q91W36 AC153899.1-201ENSMUST00000214092 1117 ntBASIC12.71□□□□□ -0.37
Usp3Q91W36 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.71□□□□□ -0.37
Usp3Q91W36 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Usp3Q91W36 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Usp3Q91W36 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.71□□□□□ -0.37
Usp3Q91W36 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Usp3Q91W36 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.71□□□□□ -0.37
Usp3Q91W36 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Usp3Q91W36 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp3Q91W36 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp3Q91W36 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Usp3Q91W36 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp3Q91W36 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Usp3Q91W36 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp3Q91W36 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp3Q91W36 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Usp3Q91W36 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp3Q91W36 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.71□□□□□ -0.38
Usp3Q91W36 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.71□□□□□ -0.38
Usp3Q91W36 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp3Q91W36 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp3Q91W36 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Usp3Q91W36 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.71□□□□□ -0.38
Usp3Q91W36 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp3Q91W36 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp3Q91W36 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp3Q91W36 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Usp3Q91W36 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp3Q91W36 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp3Q91W36 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp3Q91W36 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp3Q91W36 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp3Q91W36 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp3Q91W36 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Usp3Q91W36 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Usp3Q91W36 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp3Q91W36 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Usp3Q91W36 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp3Q91W36 Gm25700-201ENSMUST00000177693 110 ntBASIC12.7□□□□□ -0.38
Usp3Q91W36 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Usp3Q91W36 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.7□□□□□ -0.38
Usp3Q91W36 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.7□□□□□ -0.38
Usp3Q91W36 Gm9230-201ENSMUST00000188228 532 ntBASIC12.7□□□□□ -0.38
Usp3Q91W36 Gm45186-201ENSMUST00000206874 478 ntBASIC12.7□□□□□ -0.38
Usp3Q91W36 Gm44651-201ENSMUST00000207343 372 ntBASIC12.7□□□□□ -0.38
Usp3Q91W36 Gm7441-201ENSMUST00000220697 1074 ntBASIC12.7□□□□□ -0.38
Usp3Q91W36 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.7□□□□□ -0.38
Usp3Q91W36 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp3Q91W36 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp3Q91W36 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Usp3Q91W36 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Usp3Q91W36 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Usp3Q91W36 Krtap9-1-201ENSMUST00000093936 1044 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Usp3Q91W36 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp3Q91W36 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp3Q91W36 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Usp3Q91W36 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp3Q91W36 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp3Q91W36 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp3Q91W36 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Usp3Q91W36 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.7□□□□□ -0.38
Usp3Q91W36 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp3Q91W36 Il15ra-205ENSMUST00000114833 1607 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Usp3Q91W36 Gm44975-201ENSMUST00000207435 1390 ntBASIC12.69□□□□□ -0.38
Usp3Q91W36 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Usp3Q91W36 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usp3Q91W36 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usp3Q91W36 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Usp3Q91W36 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Usp3Q91W36 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usp3Q91W36 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usp3Q91W36 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usp3Q91W36 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usp3Q91W36 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Usp3Q91W36 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.69□□□□□ -0.38
Usp3Q91W36 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Usp3Q91W36 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Usp3Q91W36 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.69□□□□□ -0.38
Usp3Q91W36 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms