Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.13□□□□□ -0.47
Vsx1Q91V10 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.13□□□□□ -0.47
Vsx1Q91V10 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.13□□□□□ -0.47
Vsx1Q91V10 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Vsx1Q91V10 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vsx1Q91V10 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.12□□□□□ -0.47
Vsx1Q91V10 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Gm22133-201ENSMUST00000102082 109 ntBASIC12.12□□□□□ -0.47
Vsx1Q91V10 Gm23596-201ENSMUST00000104304 132 ntBASIC12.12□□□□□ -0.47
Vsx1Q91V10 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.12□□□□□ -0.47
Vsx1Q91V10 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Gm12899-201ENSMUST00000120565 551 ntBASIC12.12□□□□□ -0.47
Vsx1Q91V10 Mir1901-201ENSMUST00000122616 78 ntBASIC12.12□□□□□ -0.47
Vsx1Q91V10 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vsx1Q91V10 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vsx1Q91V10 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.12□□□□□ -0.47
Vsx1Q91V10 Gm43962-201ENSMUST00000203898 190 ntBASIC12.12□□□□□ -0.47
Vsx1Q91V10 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.12□□□□□ -0.47
Vsx1Q91V10 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.12□□□□□ -0.47
Vsx1Q91V10 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.12□□□□□ -0.47
Vsx1Q91V10 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.12□□□□□ -0.47
Vsx1Q91V10 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.12□□□□□ -0.47
Vsx1Q91V10 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Vsx1Q91V10 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx1Q91V10 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx1Q91V10 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Vsx1Q91V10 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx1Q91V10 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Vsx1Q91V10 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx1Q91V10 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx1Q91V10 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx1Q91V10 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx1Q91V10 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx1Q91V10 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.11□□□□□ -0.47
Vsx1Q91V10 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.11□□□□□ -0.47
Vsx1Q91V10 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx1Q91V10 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.11□□□□□ -0.47
Vsx1Q91V10 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.11□□□□□ -0.47
Vsx1Q91V10 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.11□□□□□ -0.47
Vsx1Q91V10 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.11□□□□□ -0.47
Vsx1Q91V10 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.11□□□□□ -0.47
Vsx1Q91V10 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms