Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 Gm9785-201ENSMUST00000062642 1006 ntBASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Gm44260-201ENSMUST00000204946 2094 ntBASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 AC241621.2-201ENSMUST00000223991 2151 ntBASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Gm15782-201ENSMUST00000121073 445 ntBASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Gm14460-201ENSMUST00000121511 639 ntBASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Gm43830-201ENSMUST00000198760 1067 ntBASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Gm4797-201ENSMUST00000219075 1283 ntBASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 CT009713.8-202ENSMUST00000224732 385 ntBASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 AC130671.2-201ENSMUST00000227224 1621 ntBASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp7Q8R1T1 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Gm5419-201ENSMUST00000119301 527 ntBASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Gm28323-201ENSMUST00000186817 2499 ntBASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Gm10152-201ENSMUST00000193475 1344 ntBASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Chmp7Q8R1T1 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp7Q8R1T1 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms