Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Syne4Q8CII8 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Syne4Q8CII8 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne4Q8CII8 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.8□□□□□ -0.2
Syne4Q8CII8 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne4Q8CII8 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne4Q8CII8 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.8□□□□□ -0.2
Syne4Q8CII8 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne4Q8CII8 Gm26013-201ENSMUST00000104404 119 ntBASIC13.8□□□□□ -0.2
Syne4Q8CII8 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Syne4Q8CII8 Gm15004-201ENSMUST00000119192 630 ntBASIC13.8□□□□□ -0.2
Syne4Q8CII8 Gm5419-201ENSMUST00000119301 527 ntBASIC13.8□□□□□ -0.2
Syne4Q8CII8 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC13.8□□□□□ -0.2
Syne4Q8CII8 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.8□□□□□ -0.2
Syne4Q8CII8 Gm23218-201ENSMUST00000158124 276 ntBASIC13.8□□□□□ -0.2
Syne4Q8CII8 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.8□□□□□ -0.2
Syne4Q8CII8 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Syne4Q8CII8 Gm21092-201ENSMUST00000178995 955 ntBASIC13.8□□□□□ -0.2
Syne4Q8CII8 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Syne4Q8CII8 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Syne4Q8CII8 CT485606.1-201ENSMUST00000213187 878 ntBASIC13.8□□□□□ -0.2
Syne4Q8CII8 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne4Q8CII8 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne4Q8CII8 n-R5s211-201ENSMUST00000093689 119 ntBASIC13.8□□□□□ -0.2
Syne4Q8CII8 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.8□□□□□ -0.2
Syne4Q8CII8 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Syne4Q8CII8 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne4Q8CII8 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Syne4Q8CII8 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne4Q8CII8 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.8□□□□□ -0.2
Syne4Q8CII8 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Syne4Q8CII8 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne4Q8CII8 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne4Q8CII8 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne4Q8CII8 Gm6903-201ENSMUST00000160509 1366 ntBASIC13.8□□□□□ -0.2
Syne4Q8CII8 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Syne4Q8CII8 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Syne4Q8CII8 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Syne4Q8CII8 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne4Q8CII8 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne4Q8CII8 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
Syne4Q8CII8 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Syne4Q8CII8 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne4Q8CII8 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Syne4Q8CII8 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Syne4Q8CII8 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Syne4Q8CII8 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne4Q8CII8 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne4Q8CII8 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Syne4Q8CII8 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Syne4Q8CII8 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne4Q8CII8 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne4Q8CII8 Gm13047-201ENSMUST00000117116 815 ntBASIC13.79□□□□□ -0.2
Syne4Q8CII8 Gm14247-201ENSMUST00000120950 237 ntBASIC13.79□□□□□ -0.2
Syne4Q8CII8 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC13.79□□□□□ -0.2
Syne4Q8CII8 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne4Q8CII8 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne4Q8CII8 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC13.79□□□□□ -0.2
Syne4Q8CII8 Ighv5-11-201ENSMUST00000193354 371 ntBASIC13.79□□□□□ -0.2
Syne4Q8CII8 Gm5714-201ENSMUST00000197343 566 ntBASIC13.79□□□□□ -0.2
Syne4Q8CII8 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Syne4Q8CII8 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC13.79□□□□□ -0.2
Syne4Q8CII8 AC154176.1-201ENSMUST00000225897 220 ntBASIC13.79□□□□□ -0.2
Syne4Q8CII8 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne4Q8CII8 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne4Q8CII8 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Syne4Q8CII8 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne4Q8CII8 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne4Q8CII8 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.79□□□□□ -0.2
Syne4Q8CII8 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Syne4Q8CII8 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne4Q8CII8 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne4Q8CII8 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne4Q8CII8 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne4Q8CII8 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne4Q8CII8 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne4Q8CII8 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Syne4Q8CII8 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Syne4Q8CII8 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.78□□□□□ -0.2
Syne4Q8CII8 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne4Q8CII8 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.78□□□□□ -0.2
Syne4Q8CII8 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne4Q8CII8 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne4Q8CII8 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne4Q8CII8 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne4Q8CII8 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne4Q8CII8 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne4Q8CII8 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Syne4Q8CII8 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC13.78□□□□□ -0.2
Syne4Q8CII8 Gm13668-201ENSMUST00000119237 1001 ntBASIC13.78□□□□□ -0.2
Syne4Q8CII8 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne4Q8CII8 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne4Q8CII8 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.78□□□□□ -0.2
Syne4Q8CII8 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC13.78□□□□□ -0.2
Syne4Q8CII8 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Syne4Q8CII8 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne4Q8CII8 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC13.78□□□□□ -0.2
Syne4Q8CII8 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Syne4Q8CII8 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC13.78□□□□□ -0.2
Syne4Q8CII8 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms