Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Gm13035-201ENSMUST00000117496 342 ntBASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Gm25881-201ENSMUST00000157783 103 ntBASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Gm5706-201ENSMUST00000181525 993 ntBASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Gm3332-201ENSMUST00000189337 928 ntBASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Gm5705-201ENSMUST00000066241 711 ntBASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rftn2Q8CHX7 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rftn2Q8CHX7 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rftn2Q8CHX7 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rftn2Q8CHX7 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rftn2Q8CHX7 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Rftn2Q8CHX7 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rftn2Q8CHX7 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rftn2Q8CHX7 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Rftn2Q8CHX7 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rftn2Q8CHX7 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rftn2Q8CHX7 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rftn2Q8CHX7 Gm15515-201ENSMUST00000117827 822 ntBASIC12.96□□□□□ -0.33
Rftn2Q8CHX7 Gm14724-201ENSMUST00000118400 537 ntBASIC12.96□□□□□ -0.33
Rftn2Q8CHX7 Gm11941-201ENSMUST00000119904 610 ntBASIC12.96□□□□□ -0.33
Rftn2Q8CHX7 Gm11660-201ENSMUST00000120955 412 ntBASIC12.96□□□□□ -0.33
Rftn2Q8CHX7 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rftn2Q8CHX7 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.96□□□□□ -0.33
Rftn2Q8CHX7 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rftn2Q8CHX7 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rftn2Q8CHX7 Gm4482-201ENSMUST00000200876 742 ntBASIC12.96□□□□□ -0.33
Rftn2Q8CHX7 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
Rftn2Q8CHX7 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.96□□□□□ -0.33
Rftn2Q8CHX7 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rftn2Q8CHX7 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rftn2Q8CHX7 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rftn2Q8CHX7 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.96□□□□□ -0.33
Rftn2Q8CHX7 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rftn2Q8CHX7 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rftn2Q8CHX7 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rftn2Q8CHX7 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rftn2Q8CHX7 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Rftn2Q8CHX7 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rftn2Q8CHX7 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rftn2Q8CHX7 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rftn2Q8CHX7 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rftn2Q8CHX7 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rftn2Q8CHX7 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Rftn2Q8CHX7 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rftn2Q8CHX7 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rftn2Q8CHX7 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rftn2Q8CHX7 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rftn2Q8CHX7 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rftn2Q8CHX7 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rftn2Q8CHX7 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.95□□□□□ -0.34
Rftn2Q8CHX7 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.95□□□□□ -0.34
Rftn2Q8CHX7 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.95□□□□□ -0.34
Rftn2Q8CHX7 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.95□□□□□ -0.34
Rftn2Q8CHX7 Gm23085-201ENSMUST00000157849 293 ntBASIC12.95□□□□□ -0.34
Rftn2Q8CHX7 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.95□□□□□ -0.34
Rftn2Q8CHX7 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rftn2Q8CHX7 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Rftn2Q8CHX7 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rftn2Q8CHX7 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rftn2Q8CHX7 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.95□□□□□ -0.34
Rftn2Q8CHX7 Gm18893-201ENSMUST00000198416 943 ntBASIC12.95□□□□□ -0.34
Rftn2Q8CHX7 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rftn2Q8CHX7 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms