Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
ShfQ8CG80 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.9□□□□□ -0.66
ShfQ8CG80 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
ShfQ8CG80 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
ShfQ8CG80 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ShfQ8CG80 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
ShfQ8CG80 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ShfQ8CG80 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ShfQ8CG80 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.9□□□□□ -0.66
ShfQ8CG80 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ShfQ8CG80 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
ShfQ8CG80 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ShfQ8CG80 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.9□□□□□ -0.66
ShfQ8CG80 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.9□□□□□ -0.66
ShfQ8CG80 Gm14999-201ENSMUST00000121039 624 ntBASIC10.9□□□□□ -0.66
ShfQ8CG80 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
ShfQ8CG80 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC10.9□□□□□ -0.66
ShfQ8CG80 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC10.9□□□□□ -0.66
ShfQ8CG80 Gm6222-202ENSMUST00000182143 629 ntBASIC10.9□□□□□ -0.66
ShfQ8CG80 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.9□□□□□ -0.66
ShfQ8CG80 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.9□□□□□ -0.66
ShfQ8CG80 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.9□□□□□ -0.66
ShfQ8CG80 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
ShfQ8CG80 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ShfQ8CG80 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
ShfQ8CG80 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ShfQ8CG80 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.9□□□□□ -0.66
ShfQ8CG80 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ShfQ8CG80 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ShfQ8CG80 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
ShfQ8CG80 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ShfQ8CG80 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.9□□□□□ -0.66
ShfQ8CG80 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
ShfQ8CG80 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
ShfQ8CG80 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
ShfQ8CG80 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
ShfQ8CG80 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
ShfQ8CG80 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
ShfQ8CG80 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.67
ShfQ8CG80 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
ShfQ8CG80 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
ShfQ8CG80 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.9□□□□□ -0.67
ShfQ8CG80 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
ShfQ8CG80 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.89□□□□□ -0.67
ShfQ8CG80 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Gm11478-201ENSMUST00000117851 599 ntBASIC10.89□□□□□ -0.67
ShfQ8CG80 Gm12058-201ENSMUST00000118614 437 ntBASIC10.89□□□□□ -0.67
ShfQ8CG80 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.89□□□□□ -0.67
ShfQ8CG80 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.89□□□□□ -0.67
ShfQ8CG80 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.89□□□□□ -0.67
ShfQ8CG80 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.89□□□□□ -0.67
ShfQ8CG80 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
ShfQ8CG80 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Gm37201-201ENSMUST00000191845 523 ntBASIC10.89□□□□□ -0.67
ShfQ8CG80 Gm42937-201ENSMUST00000197360 752 ntBASIC10.89□□□□□ -0.67
ShfQ8CG80 Gm18711-201ENSMUST00000199341 750 ntBASIC10.89□□□□□ -0.67
ShfQ8CG80 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.89□□□□□ -0.67
ShfQ8CG80 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
ShfQ8CG80 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
ShfQ8CG80 Snora73a-201ENSMUST00000082453 205 ntBASIC10.89□□□□□ -0.67
ShfQ8CG80 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.89□□□□□ -0.67
ShfQ8CG80 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
ShfQ8CG80 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
ShfQ8CG80 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
ShfQ8CG80 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
ShfQ8CG80 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
ShfQ8CG80 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ShfQ8CG80 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms