Protein–RNA interactions for Protein: Q8CBG9

Rnf170, E3 ubiquitin-protein ligase RNF170, mousemouse

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf170Q8CBG9 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Rnf170Q8CBG9 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf170Q8CBG9 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf170Q8CBG9 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf170Q8CBG9 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Rnf170Q8CBG9 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf170Q8CBG9 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf170Q8CBG9 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf170Q8CBG9 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf170Q8CBG9 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Rnf170Q8CBG9 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Rnf170Q8CBG9 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Rnf170Q8CBG9 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC10.39□□□□□ -0.75
Rnf170Q8CBG9 Gm6266-201ENSMUST00000203844 806 ntBASIC10.39□□□□□ -0.75
Rnf170Q8CBG9 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.39□□□□□ -0.75
Rnf170Q8CBG9 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf170Q8CBG9 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf170Q8CBG9 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf170Q8CBG9 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Rnf170Q8CBG9 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
Rnf170Q8CBG9 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf170Q8CBG9 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf170Q8CBG9 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.39□□□□□ -0.75
Rnf170Q8CBG9 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf170Q8CBG9 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Rnf170Q8CBG9 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf170Q8CBG9 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Snord83b-201ENSMUST00000104546 94 ntBASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Gm12384-201ENSMUST00000119228 919 ntBASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Gm27682-201ENSMUST00000183930 110 ntBASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Gm18187-201ENSMUST00000196476 984 ntBASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf170Q8CBG9 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf170Q8CBG9 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.37□□□□□ -0.75
Rnf170Q8CBG9 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.37□□□□□ -0.75
Rnf170Q8CBG9 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf170Q8CBG9 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf170Q8CBG9 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf170Q8CBG9 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf170Q8CBG9 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf170Q8CBG9 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf170Q8CBG9 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf170Q8CBG9 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf170Q8CBG9 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf170Q8CBG9 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf170Q8CBG9 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf170Q8CBG9 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC10.37□□□□□ -0.75
Rnf170Q8CBG9 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC10.37□□□□□ -0.75
Rnf170Q8CBG9 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms