Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Gm44958-201ENSMUST00000203734 736 ntBASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Gm44882-201ENSMUST00000205702 802 ntBASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Cog3-203ENSMUST00000227473 4197 ntBASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Gm6621-201ENSMUST00000193251 772 ntBASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sh3rf3Q8C120 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Map1b-203ENSMUST00000223725 2669 ntBASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Gm14832-201ENSMUST00000121289 322 ntBASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms