Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Gm23251-201ENSMUST00000103773 110 ntBASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Gm13045-201ENSMUST00000119019 712 ntBASIC12.97□□□□□ -0.33
Rd3Q8BRE0 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.97□□□□□ -0.33
Rd3Q8BRE0 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Gm37835-201ENSMUST00000193305 361 ntBASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Gm43184-201ENSMUST00000197247 542 ntBASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.97□□□□□ -0.33
Rd3Q8BRE0 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.97□□□□□ -0.33
Rd3Q8BRE0 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rd3Q8BRE0 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.96□□□□□ -0.33
Rd3Q8BRE0 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rd3Q8BRE0 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rd3Q8BRE0 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.96□□□□□ -0.33
Rd3Q8BRE0 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rd3Q8BRE0 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.96□□□□□ -0.33
Rd3Q8BRE0 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.96□□□□□ -0.33
Rd3Q8BRE0 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rd3Q8BRE0 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rd3Q8BRE0 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.96□□□□□ -0.33
Rd3Q8BRE0 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rd3Q8BRE0 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rd3Q8BRE0 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Rd3Q8BRE0 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rd3Q8BRE0 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rd3Q8BRE0 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rd3Q8BRE0 Rprl1-201ENSMUST00000158050 327 ntBASIC12.96□□□□□ -0.33
Rd3Q8BRE0 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.33
Rd3Q8BRE0 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rd3Q8BRE0 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rd3Q8BRE0 Gm5051-201ENSMUST00000204085 485 ntBASIC12.96□□□□□ -0.33
Rd3Q8BRE0 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rd3Q8BRE0 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rd3Q8BRE0 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rd3Q8BRE0 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rd3Q8BRE0 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rd3Q8BRE0 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rd3Q8BRE0 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rd3Q8BRE0 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Rd3Q8BRE0 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.96□□□□□ -0.33
Rd3Q8BRE0 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.96□□□□□ -0.33
Rd3Q8BRE0 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rd3Q8BRE0 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rd3Q8BRE0 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rd3Q8BRE0 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rd3Q8BRE0 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rd3Q8BRE0 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Rd3Q8BRE0 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rd3Q8BRE0 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rd3Q8BRE0 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rd3Q8BRE0 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rd3Q8BRE0 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms