Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.72□□□□□ -0.53
Vrk1Q80X41 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.72□□□□□ -0.53
Vrk1Q80X41 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vrk1Q80X41 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vrk1Q80X41 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Vrk1Q80X41 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vrk1Q80X41 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Vrk1Q80X41 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vrk1Q80X41 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vrk1Q80X41 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.72□□□□□ -0.53
Vrk1Q80X41 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vrk1Q80X41 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vrk1Q80X41 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vrk1Q80X41 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Vrk1Q80X41 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vrk1Q80X41 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vrk1Q80X41 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vrk1Q80X41 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vrk1Q80X41 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vrk1Q80X41 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vrk1Q80X41 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vrk1Q80X41 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.71□□□□□ -0.53
Vrk1Q80X41 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Vrk1Q80X41 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vrk1Q80X41 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vrk1Q80X41 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.71□□□□□ -0.53
Vrk1Q80X41 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vrk1Q80X41 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Vrk1Q80X41 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vrk1Q80X41 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vrk1Q80X41 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vrk1Q80X41 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vrk1Q80X41 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vrk1Q80X41 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Vrk1Q80X41 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Vrk1Q80X41 Gm22133-201ENSMUST00000102082 109 ntBASIC11.71□□□□□ -0.53
Vrk1Q80X41 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.71□□□□□ -0.53
Vrk1Q80X41 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.71□□□□□ -0.53
Vrk1Q80X41 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vrk1Q80X41 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vrk1Q80X41 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vrk1Q80X41 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.53
Vrk1Q80X41 Gm18038-201ENSMUST00000197900 485 ntBASIC11.71□□□□□ -0.53
Vrk1Q80X41 Gm9555-201ENSMUST00000200908 583 ntBASIC11.71□□□□□ -0.53
Vrk1Q80X41 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.71□□□□□ -0.53
Vrk1Q80X41 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.71□□□□□ -0.53
Vrk1Q80X41 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vrk1Q80X41 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Vrk1Q80X41 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.71□□□□□ -0.53
Vrk1Q80X41 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vrk1Q80X41 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
Vrk1Q80X41 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Vrk1Q80X41 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vrk1Q80X41 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Vrk1Q80X41 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vrk1Q80X41 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vrk1Q80X41 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vrk1Q80X41 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Vrk1Q80X41 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.71□□□□□ -0.54
Vrk1Q80X41 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vrk1Q80X41 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vrk1Q80X41 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.7□□□□□ -0.54
Vrk1Q80X41 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Gm15515-201ENSMUST00000117827 822 ntBASIC11.7□□□□□ -0.54
Vrk1Q80X41 Gm13408-201ENSMUST00000119822 798 ntBASIC11.7□□□□□ -0.54
Vrk1Q80X41 Gm13935-201ENSMUST00000121859 798 ntBASIC11.7□□□□□ -0.54
Vrk1Q80X41 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Gm43962-201ENSMUST00000203898 190 ntBASIC11.7□□□□□ -0.54
Vrk1Q80X41 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms