Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.41□□□□□ -0.58
Pif1Q80SX8 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.41□□□□□ -0.58
Pif1Q80SX8 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.41□□□□□ -0.58
Pif1Q80SX8 Gm37666-201ENSMUST00000194110 866 ntBASIC11.41□□□□□ -0.58
Pif1Q80SX8 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.41□□□□□ -0.58
Pif1Q80SX8 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.41□□□□□ -0.58
Pif1Q80SX8 Spcs1-203ENSMUST00000226374 592 ntBASIC11.41□□□□□ -0.58
Pif1Q80SX8 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Pif1Q80SX8 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pif1Q80SX8 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pif1Q80SX8 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pif1Q80SX8 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Pif1Q80SX8 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pif1Q80SX8 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Pif1Q80SX8 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Pif1Q80SX8 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pif1Q80SX8 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.41□□□□□ -0.58
Pif1Q80SX8 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pif1Q80SX8 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pif1Q80SX8 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pif1Q80SX8 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.41□□□□□ -0.58
Pif1Q80SX8 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pif1Q80SX8 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pif1Q80SX8 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.41□□□□□ -0.58
Pif1Q80SX8 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pif1Q80SX8 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.41□□□□□ -0.58
Pif1Q80SX8 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.41□□□□□ -0.58
Pif1Q80SX8 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Pif1Q80SX8 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Pif1Q80SX8 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Pif1Q80SX8 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Pif1Q80SX8 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pif1Q80SX8 B230323A14Rik-201ENSMUST00000180488 2864 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Gm16551-203ENSMUST00000160979 3162 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Gm14644-201ENSMUST00000116671 647 ntBASIC11.4□□□□□ -0.58
Pif1Q80SX8 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.4□□□□□ -0.58
Pif1Q80SX8 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.4□□□□□ -0.58
Pif1Q80SX8 AU022133-201ENSMUST00000200601 873 ntBASIC11.4□□□□□ -0.58
Pif1Q80SX8 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pif1Q80SX8 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pif1Q80SX8 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pif1Q80SX8 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pif1Q80SX8 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pif1Q80SX8 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Pif1Q80SX8 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pif1Q80SX8 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pif1Q80SX8 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.4□□□□□ -0.59
Pif1Q80SX8 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Pif1Q80SX8 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pif1Q80SX8 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.4□□□□□ -0.59
Pif1Q80SX8 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pif1Q80SX8 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pif1Q80SX8 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Pif1Q80SX8 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pif1Q80SX8 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pif1Q80SX8 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Pif1Q80SX8 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Gm9062-201ENSMUST00000117712 727 ntBASIC11.39□□□□□ -0.59
Pif1Q80SX8 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms