Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ctdp1Q7TSG2 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ctdp1Q7TSG2 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ctdp1Q7TSG2 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ctdp1Q7TSG2 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC13.36□□□□□ -0.27
Ctdp1Q7TSG2 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ctdp1Q7TSG2 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Gm22121-201ENSMUST00000175148 54 ntBASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Gm37497-201ENSMUST00000195830 798 ntBASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Gm8099-201ENSMUST00000200510 742 ntBASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ctdp1Q7TSG2 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Gm24231-201ENSMUST00000104315 133 ntBASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Gm15703-201ENSMUST00000120250 880 ntBASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Gm16479-201ENSMUST00000121706 932 ntBASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Gm35960-201ENSMUST00000202712 767 ntBASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.34□□□□□ -0.27
Ctdp1Q7TSG2 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms