Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Rad54bQ6PFE3 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rad54bQ6PFE3 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Gm11478-201ENSMUST00000117851 599 ntBASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Gm12058-201ENSMUST00000118614 437 ntBASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rad54bQ6PFE3 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Gm4984-201ENSMUST00000115987 360 ntBASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Gm14999-201ENSMUST00000121039 624 ntBASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Gm13570-201ENSMUST00000140763 309 ntBASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Gm25261-201ENSMUST00000157416 134 ntBASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Gm18711-201ENSMUST00000199341 750 ntBASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.31□□□□□ -0.44
Rad54bQ6PFE3 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rad54bQ6PFE3 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rad54bQ6PFE3 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rad54bQ6PFE3 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rad54bQ6PFE3 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rad54bQ6PFE3 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rad54bQ6PFE3 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rad54bQ6PFE3 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.3□□□□□ -0.44
Rad54bQ6PFE3 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rad54bQ6PFE3 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms