Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 Gm7561-201ENSMUST00000211203 886 ntBASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smarcd3Q6P9Z1 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Gm35960-201ENSMUST00000202712 767 ntBASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Gm6007-201ENSMUST00000208170 823 ntBASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Gm10268-201ENSMUST00000085340 555 ntBASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Smarcd3Q6P9Z1 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smarcd3Q6P9Z1 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smarcd3Q6P9Z1 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smarcd3Q6P9Z1 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smarcd3Q6P9Z1 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smarcd3Q6P9Z1 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.21□□□□□ -0.62
Smarcd3Q6P9Z1 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Smarcd3Q6P9Z1 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smarcd3Q6P9Z1 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smarcd3Q6P9Z1 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smarcd3Q6P9Z1 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Smarcd3Q6P9Z1 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smarcd3Q6P9Z1 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms