Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt40Q6IFX3 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
Krt40Q6IFX3 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt40Q6IFX3 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Krt40Q6IFX3 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt40Q6IFX3 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Krt40Q6IFX3 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt40Q6IFX3 Gm19353-201ENSMUST00000184561 445 ntBASIC14.34□□□□□ -0.11
Krt40Q6IFX3 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.34□□□□□ -0.11
Krt40Q6IFX3 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt40Q6IFX3 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.34□□□□□ -0.11
Krt40Q6IFX3 Gm43947-201ENSMUST00000203019 959 ntBASIC14.34□□□□□ -0.11
Krt40Q6IFX3 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Krt40Q6IFX3 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt40Q6IFX3 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Krt40Q6IFX3 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Krt40Q6IFX3 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt40Q6IFX3 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.34□□□□□ -0.11
Krt40Q6IFX3 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt40Q6IFX3 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC14.34□□□□□ -0.11
Krt40Q6IFX3 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt40Q6IFX3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Krt40Q6IFX3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Krt40Q6IFX3 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Krt40Q6IFX3 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt40Q6IFX3 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
Krt40Q6IFX3 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.34□□□□□ -0.11
Krt40Q6IFX3 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Krt40Q6IFX3 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Krt40Q6IFX3 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Krt40Q6IFX3 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Krt40Q6IFX3 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Krt40Q6IFX3 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt40Q6IFX3 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Krt40Q6IFX3 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt40Q6IFX3 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt40Q6IFX3 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt40Q6IFX3 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.33□□□□□ -0.12
Krt40Q6IFX3 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt40Q6IFX3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt40Q6IFX3 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt40Q6IFX3 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Krt40Q6IFX3 Gm24891-201ENSMUST00000104391 136 ntBASIC14.33□□□□□ -0.12
Krt40Q6IFX3 Gm12165-201ENSMUST00000117047 342 ntBASIC14.33□□□□□ -0.12
Krt40Q6IFX3 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.33□□□□□ -0.12
Krt40Q6IFX3 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Krt40Q6IFX3 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC14.33□□□□□ -0.12
Krt40Q6IFX3 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC14.33□□□□□ -0.12
Krt40Q6IFX3 Gm17931-201ENSMUST00000208132 634 ntBASIC14.33□□□□□ -0.12
Krt40Q6IFX3 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt40Q6IFX3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Krt40Q6IFX3 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Krt40Q6IFX3 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Krt40Q6IFX3 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt40Q6IFX3 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Krt40Q6IFX3 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt40Q6IFX3 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt40Q6IFX3 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Krt40Q6IFX3 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Krt40Q6IFX3 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt40Q6IFX3 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt40Q6IFX3 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Krt40Q6IFX3 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Krt40Q6IFX3 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Gm28686-201ENSMUST00000187404 609 ntBASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Gm8959-201ENSMUST00000213150 571 ntBASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Gm10288-201ENSMUST00000084614 537 ntBASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms