Protein–RNA interactions for Protein: Q62225

Cish, Cytokine-inducible SH2-containing protein, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CishQ62225 Gm13296-201ENSMUST00000117854 997 ntBASIC11.67□□□□□ -0.54
CishQ62225 Gm11362-201ENSMUST00000118838 850 ntBASIC11.67□□□□□ -0.54
CishQ62225 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.67□□□□□ -0.54
CishQ62225 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CishQ62225 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
CishQ62225 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.67□□□□□ -0.54
CishQ62225 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.67□□□□□ -0.54
CishQ62225 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CishQ62225 Rprl1-201ENSMUST00000158050 327 ntBASIC11.67□□□□□ -0.54
CishQ62225 Gm26361-201ENSMUST00000158868 186 ntBASIC11.67□□□□□ -0.54
CishQ62225 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.67□□□□□ -0.54
CishQ62225 Gm4857-201ENSMUST00000192718 785 ntBASIC11.67□□□□□ -0.54
CishQ62225 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.67□□□□□ -0.54
CishQ62225 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.67□□□□□ -0.54
CishQ62225 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CishQ62225 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CishQ62225 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CishQ62225 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.67□□□□□ -0.54
CishQ62225 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CishQ62225 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CishQ62225 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CishQ62225 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CishQ62225 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CishQ62225 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CishQ62225 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
CishQ62225 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CishQ62225 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CishQ62225 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CishQ62225 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
CishQ62225 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CishQ62225 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
CishQ62225 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CishQ62225 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CishQ62225 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
CishQ62225 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.67□□□□□ -0.54
CishQ62225 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
CishQ62225 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
CishQ62225 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
CishQ62225 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.66□□□□□ -0.54
CishQ62225 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
CishQ62225 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.66□□□□□ -0.54
CishQ62225 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.66□□□□□ -0.54
CishQ62225 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.66□□□□□ -0.54
CishQ62225 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.66□□□□□ -0.54
CishQ62225 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.66□□□□□ -0.54
CishQ62225 Gm25700-201ENSMUST00000177693 110 ntBASIC11.66□□□□□ -0.54
CishQ62225 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.66□□□□□ -0.54
CishQ62225 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.66□□□□□ -0.54
CishQ62225 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.66□□□□□ -0.54
CishQ62225 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
CishQ62225 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
CishQ62225 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.66□□□□□ -0.54
CishQ62225 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
CishQ62225 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.66□□□□□ -0.54
CishQ62225 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
CishQ62225 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CishQ62225 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.65□□□□□ -0.54
CishQ62225 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.65□□□□□ -0.54
CishQ62225 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CishQ62225 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CishQ62225 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.65□□□□□ -0.54
CishQ62225 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
CishQ62225 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CishQ62225 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CishQ62225 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
CishQ62225 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CishQ62225 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CishQ62225 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CishQ62225 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms