Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd1Q61466 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Smarcd1Q61466 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd1Q61466 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd1Q61466 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd1Q61466 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd1Q61466 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd1Q61466 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd1Q61466 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.74□□□□□ -0.37
Smarcd1Q61466 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd1Q61466 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.73□□□□□ -0.37
Smarcd1Q61466 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.73□□□□□ -0.37
Smarcd1Q61466 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.73□□□□□ -0.37
Smarcd1Q61466 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Gm16505-201ENSMUST00000179981 232 ntBASIC12.73□□□□□ -0.37
Smarcd1Q61466 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Gm7003-201ENSMUST00000195089 312 ntBASIC12.73□□□□□ -0.37
Smarcd1Q61466 Gm37466-201ENSMUST00000195692 652 ntBASIC12.73□□□□□ -0.37
Smarcd1Q61466 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Gm17827-201ENSMUST00000211825 742 ntBASIC12.73□□□□□ -0.37
Smarcd1Q61466 Gm18730-201ENSMUST00000218038 343 ntBASIC12.73□□□□□ -0.37
Smarcd1Q61466 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd1Q61466 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.73□□□□□ -0.37
Smarcd1Q61466 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd1Q61466 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.73□□□□□ -0.37
Smarcd1Q61466 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd1Q61466 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Smarcd1Q61466 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd1Q61466 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.72□□□□□ -0.37
Smarcd1Q61466 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.72□□□□□ -0.37
Smarcd1Q61466 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd1Q61466 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Smarcd1Q61466 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.71□□□□□ -0.37
Smarcd1Q61466 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcd1Q61466 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.71□□□□□ -0.37
Smarcd1Q61466 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Smarcd1Q61466 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcd1Q61466 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcd1Q61466 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms