Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six4Q61321 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.33□□□□□ -0.44
Six4Q61321 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six4Q61321 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six4Q61321 Map1b-203ENSMUST00000223725 2669 ntBASIC12.33□□□□□ -0.44
Six4Q61321 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Six4Q61321 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Six4Q61321 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six4Q61321 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Six4Q61321 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Six4Q61321 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Six4Q61321 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Six4Q61321 Gm25668-201ENSMUST00000157700 129 ntBASIC12.33□□□□□ -0.44
Six4Q61321 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Six4Q61321 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Six4Q61321 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.33□□□□□ -0.44
Six4Q61321 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.33□□□□□ -0.44
Six4Q61321 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.33□□□□□ -0.44
Six4Q61321 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Six4Q61321 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.33□□□□□ -0.44
Six4Q61321 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Six4Q61321 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six4Q61321 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six4Q61321 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six4Q61321 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six4Q61321 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six4Q61321 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six4Q61321 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six4Q61321 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six4Q61321 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six4Q61321 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six4Q61321 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six4Q61321 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six4Q61321 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six4Q61321 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Six4Q61321 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Six4Q61321 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Six4Q61321 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.33□□□□□ -0.44
Six4Q61321 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six4Q61321 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Six4Q61321 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six4Q61321 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.32□□□□□ -0.44
Six4Q61321 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Six4Q61321 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Six4Q61321 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Six4Q61321 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six4Q61321 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Six4Q61321 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Six4Q61321 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six4Q61321 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six4Q61321 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six4Q61321 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.32□□□□□ -0.44
Six4Q61321 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six4Q61321 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six4Q61321 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six4Q61321 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Six4Q61321 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.32□□□□□ -0.44
Six4Q61321 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.32□□□□□ -0.44
Six4Q61321 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six4Q61321 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.32□□□□□ -0.44
Six4Q61321 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.32□□□□□ -0.44
Six4Q61321 Gm38241-201ENSMUST00000192641 898 ntBASIC12.32□□□□□ -0.44
Six4Q61321 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Six4Q61321 Gm42599-201ENSMUST00000201308 469 ntBASIC12.32□□□□□ -0.44
Six4Q61321 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six4Q61321 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six4Q61321 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six4Q61321 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six4Q61321 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.32□□□□□ -0.44
Six4Q61321 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six4Q61321 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six4Q61321 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six4Q61321 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six4Q61321 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six4Q61321 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six4Q61321 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Six4Q61321 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Six4Q61321 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Six4Q61321 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Six4Q61321 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six4Q61321 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Six4Q61321 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Six4Q61321 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.31□□□□□ -0.44
Six4Q61321 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.31□□□□□ -0.44
Six4Q61321 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six4Q61321 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Six4Q61321 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Six4Q61321 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six4Q61321 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six4Q61321 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Six4Q61321 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six4Q61321 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six4Q61321 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six4Q61321 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six4Q61321 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Six4Q61321 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six4Q61321 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six4Q61321 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Six4Q61321 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.31□□□□□ -0.44
Six4Q61321 Gm32999-201ENSMUST00000192693 562 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms