Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Gm15808-201ENSMUST00000119046 604 ntBASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Gm44651-201ENSMUST00000207343 372 ntBASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Nlrc4Q3UP24 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nlrc4Q3UP24 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nlrc4Q3UP24 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.35
Nlrc4Q3UP24 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Nlrc4Q3UP24 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nlrc4Q3UP24 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Gm11989-201ENSMUST00000117240 672 ntBASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Gm11362-201ENSMUST00000118838 850 ntBASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Gm32999-201ENSMUST00000192693 562 ntBASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Gm18711-201ENSMUST00000199341 750 ntBASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms