Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Upf3aQ3ULJ3 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.88□□□□□ -0.35
Upf3aQ3ULJ3 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upf3aQ3ULJ3 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Upf3aQ3ULJ3 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.88□□□□□ -0.35
Upf3aQ3ULJ3 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Gm11663-201ENSMUST00000117888 290 ntBASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Gm15573-201ENSMUST00000119487 540 ntBASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Gm14247-201ENSMUST00000120950 237 ntBASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Gm8365-201ENSMUST00000197334 648 ntBASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Grk6-205ENSMUST00000224653 2976 ntBASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.87□□□□□ -0.35
Upf3aQ3ULJ3 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Gm15595-201ENSMUST00000120840 961 ntBASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Gm22144-201ENSMUST00000157402 102 ntBASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Gm9540-201ENSMUST00000188230 478 ntBASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Gm17831-201ENSMUST00000205579 900 ntBASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Gm9132-201ENSMUST00000210182 832 ntBASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upf3aQ3ULJ3 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms