Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NrlP54846 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
NrlP54846 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NrlP54846 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.04□□□□□ -0.32
NrlP54846 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NrlP54846 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NrlP54846 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NrlP54846 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NrlP54846 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NrlP54846 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.04□□□□□ -0.32
NrlP54846 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NrlP54846 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NrlP54846 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NrlP54846 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NrlP54846 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.03□□□□□ -0.32
NrlP54846 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NrlP54846 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.03□□□□□ -0.32
NrlP54846 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NrlP54846 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NrlP54846 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NrlP54846 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NrlP54846 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NrlP54846 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NrlP54846 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NrlP54846 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.03□□□□□ -0.32
NrlP54846 Gm11941-201ENSMUST00000119904 610 ntBASIC13.03□□□□□ -0.32
NrlP54846 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NrlP54846 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
NrlP54846 Gm19459-201ENSMUST00000176240 835 ntBASIC13.03□□□□□ -0.32
NrlP54846 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.03□□□□□ -0.32
NrlP54846 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NrlP54846 Gm44958-201ENSMUST00000203734 736 ntBASIC13.03□□□□□ -0.32
NrlP54846 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC13.03□□□□□ -0.32
NrlP54846 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.03□□□□□ -0.32
NrlP54846 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.03□□□□□ -0.32
NrlP54846 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NrlP54846 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
NrlP54846 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
NrlP54846 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
NrlP54846 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NrlP54846 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NrlP54846 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NrlP54846 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NrlP54846 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NrlP54846 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NrlP54846 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.03□□□□□ -0.32
NrlP54846 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NrlP54846 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NrlP54846 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
NrlP54846 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NrlP54846 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NrlP54846 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
NrlP54846 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NrlP54846 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
NrlP54846 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NrlP54846 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
NrlP54846 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NrlP54846 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.02□□□□□ -0.32
NrlP54846 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
NrlP54846 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
NrlP54846 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NrlP54846 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.02□□□□□ -0.32
NrlP54846 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
NrlP54846 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
NrlP54846 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
NrlP54846 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NrlP54846 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NrlP54846 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.02□□□□□ -0.33
NrlP54846 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NrlP54846 Gm24231-201ENSMUST00000104315 133 ntBASIC13.02□□□□□ -0.33
NrlP54846 Gm14665-201ENSMUST00000122294 557 ntBASIC13.02□□□□□ -0.33
NrlP54846 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.02□□□□□ -0.33
NrlP54846 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.02□□□□□ -0.33
NrlP54846 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.02□□□□□ -0.33
NrlP54846 Gm43830-201ENSMUST00000198760 1067 ntBASIC13.02□□□□□ -0.33
NrlP54846 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.02□□□□□ -0.33
NrlP54846 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.02□□□□□ -0.33
NrlP54846 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NrlP54846 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NrlP54846 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
NrlP54846 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.02□□□□□ -0.33
NrlP54846 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.02□□□□□ -0.33
NrlP54846 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.02□□□□□ -0.33
NrlP54846 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.02□□□□□ -0.33
NrlP54846 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
NrlP54846 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.02□□□□□ -0.33
NrlP54846 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NrlP54846 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NrlP54846 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NrlP54846 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NrlP54846 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NrlP54846 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NrlP54846 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
NrlP54846 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NrlP54846 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.01□□□□□ -0.33
NrlP54846 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NrlP54846 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NrlP54846 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NrlP54846 Gm12501-201ENSMUST00000119163 529 ntBASIC13.01□□□□□ -0.33
NrlP54846 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms