Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.59□□□□□ -0.55
Nkx2-6P43688 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Gm22133-201ENSMUST00000102082 109 ntBASIC11.59□□□□□ -0.55
Nkx2-6P43688 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Gm12176-201ENSMUST00000121420 875 ntBASIC11.59□□□□□ -0.55
Nkx2-6P43688 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.59□□□□□ -0.55
Nkx2-6P43688 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Gm9022-201ENSMUST00000182482 992 ntBASIC11.59□□□□□ -0.55
Nkx2-6P43688 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Gm43962-201ENSMUST00000203898 190 ntBASIC11.59□□□□□ -0.55
Nkx2-6P43688 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.59□□□□□ -0.55
Nkx2-6P43688 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.59□□□□□ -0.55
Nkx2-6P43688 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.59□□□□□ -0.55
Nkx2-6P43688 Gm270-201ENSMUST00000223010 976 ntBASIC11.59□□□□□ -0.55
Nkx2-6P43688 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.55
Nkx2-6P43688 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.58□□□□□ -0.55
Nkx2-6P43688 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.58□□□□□ -0.56
Nkx2-6P43688 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.58□□□□□ -0.56
Nkx2-6P43688 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Gm11989-201ENSMUST00000117240 672 ntBASIC11.58□□□□□ -0.56
Nkx2-6P43688 Gm9062-201ENSMUST00000117712 727 ntBASIC11.58□□□□□ -0.56
Nkx2-6P43688 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.58□□□□□ -0.56
Nkx2-6P43688 Gm11362-201ENSMUST00000118838 850 ntBASIC11.58□□□□□ -0.56
Nkx2-6P43688 Gm15711-201ENSMUST00000118889 535 ntBASIC11.58□□□□□ -0.56
Nkx2-6P43688 Gm11450-201ENSMUST00000121144 333 ntBASIC11.58□□□□□ -0.56
Nkx2-6P43688 Gm14760-201ENSMUST00000121831 999 ntBASIC11.58□□□□□ -0.56
Nkx2-6P43688 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.58□□□□□ -0.56
Nkx2-6P43688 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.58□□□□□ -0.56
Nkx2-6P43688 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Gm24514-201ENSMUST00000174961 285 ntBASIC11.58□□□□□ -0.56
Nkx2-6P43688 Gm5523-201ENSMUST00000180415 997 ntBASIC11.58□□□□□ -0.56
Nkx2-6P43688 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.58□□□□□ -0.56
Nkx2-6P43688 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.58□□□□□ -0.56
Nkx2-6P43688 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.58□□□□□ -0.56
Nkx2-6P43688 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Spcs1-203ENSMUST00000226374 592 ntBASIC11.58□□□□□ -0.56
Nkx2-6P43688 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-6P43688 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms