Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Sox18P43680 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 AC117797.1-201ENSMUST00000223977 695 ntBASIC11.92□□□□□ -0.5
Sox18P43680 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Sox18P43680 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.92□□□□□ -0.5
Sox18P43680 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Sox18P43680 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Sox18P43680 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Sox18P43680 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox18P43680 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sox18P43680 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sox18P43680 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox18P43680 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox18P43680 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox18P43680 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox18P43680 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox18P43680 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sox18P43680 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sox18P43680 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.91□□□□□ -0.5
Sox18P43680 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox18P43680 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.91□□□□□ -0.5
Sox18P43680 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sox18P43680 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Sox18P43680 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox18P43680 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox18P43680 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sox18P43680 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sox18P43680 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox18P43680 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox18P43680 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Sox18P43680 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Sox18P43680 Gm14739-201ENSMUST00000120424 802 ntBASIC11.91□□□□□ -0.5
Sox18P43680 Gm11622-201ENSMUST00000120525 691 ntBASIC11.91□□□□□ -0.5
Sox18P43680 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox18P43680 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.91□□□□□ -0.5
Sox18P43680 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.91□□□□□ -0.5
Sox18P43680 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.91□□□□□ -0.5
Sox18P43680 Mir7221-201ENSMUST00000184009 72 ntBASIC11.91□□□□□ -0.5
Sox18P43680 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.91□□□□□ -0.5
Sox18P43680 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Sox18P43680 Gm37517-201ENSMUST00000194004 1289 ntBASIC11.91□□□□□ -0.5
Sox18P43680 Gm37973-201ENSMUST00000195767 1289 ntBASIC11.91□□□□□ -0.5
Sox18P43680 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sox18P43680 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.91□□□□□ -0.5
Sox18P43680 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.91□□□□□ -0.5
Sox18P43680 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.91□□□□□ -0.5
Sox18P43680 AC160962.2-201ENSMUST00000224761 632 ntBASIC11.91□□□□□ -0.5
Sox18P43680 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Sox18P43680 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Sox18P43680 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox18P43680 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Sox18P43680 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Sox18P43680 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Sox18P43680 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sox18P43680 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Sox18P43680 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox18P43680 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sox18P43680 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox18P43680 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sox18P43680 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox18P43680 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.91□□□□□ -0.5
Sox18P43680 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox18P43680 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sox18P43680 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox18P43680 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox18P43680 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sox18P43680 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.91□□□□□ -0.5
Sox18P43680 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox18P43680 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Sox18P43680 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox18P43680 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox18P43680 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox18P43680 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox18P43680 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox18P43680 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox18P43680 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox18P43680 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox18P43680 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox18P43680 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.9□□□□□ -0.5
Sox18P43680 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.5
Sox18P43680 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Sox18P43680 E130114P18Rik-201ENSMUST00000107067 1092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox18P43680 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox18P43680 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox18P43680 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox18P43680 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.9□□□□□ -0.5
Sox18P43680 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.9□□□□□ -0.5
Sox18P43680 Gm23673-201ENSMUST00000157474 298 ntBASIC11.9□□□□□ -0.5
Sox18P43680 Gm22138-201ENSMUST00000158748 128 ntBASIC11.9□□□□□ -0.5
Sox18P43680 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms