Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd9P40240 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd9P40240 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd9P40240 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cd9P40240 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cd9P40240 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd9P40240 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd9P40240 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd9P40240 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd9P40240 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd9P40240 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.07□□□□□ -0.48
Cd9P40240 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Cd9P40240 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd9P40240 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd9P40240 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.07□□□□□ -0.48
Cd9P40240 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd9P40240 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd9P40240 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd9P40240 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd9P40240 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cd9P40240 Gm5419-201ENSMUST00000119301 527 ntBASIC12.07□□□□□ -0.48
Cd9P40240 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cd9P40240 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd9P40240 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cd9P40240 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd9P40240 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.07□□□□□ -0.48
Cd9P40240 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.07□□□□□ -0.48
Cd9P40240 Gm31256-201ENSMUST00000194705 506 ntBASIC12.07□□□□□ -0.48
Cd9P40240 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd9P40240 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cd9P40240 Gm19187-201ENSMUST00000206781 892 ntBASIC12.07□□□□□ -0.48
Cd9P40240 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd9P40240 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd9P40240 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cd9P40240 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd9P40240 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cd9P40240 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd9P40240 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.07□□□□□ -0.48
Cd9P40240 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd9P40240 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd9P40240 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cd9P40240 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cd9P40240 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd9P40240 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cd9P40240 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cd9P40240 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cd9P40240 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cd9P40240 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cd9P40240 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd9P40240 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Cd9P40240 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cd9P40240 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.06□□□□□ -0.48
Cd9P40240 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd9P40240 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.06□□□□□ -0.48
Cd9P40240 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd9P40240 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd9P40240 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.06□□□□□ -0.48
Cd9P40240 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Cd9P40240 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd9P40240 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd9P40240 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cd9P40240 Gm23270-201ENSMUST00000104055 131 ntBASIC12.06□□□□□ -0.48
Cd9P40240 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Cd9P40240 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd9P40240 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cd9P40240 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cd9P40240 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cd9P40240 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.06□□□□□ -0.48
Cd9P40240 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Cd9P40240 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.06□□□□□ -0.48
Cd9P40240 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.06□□□□□ -0.48
Cd9P40240 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cd9P40240 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd9P40240 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.06□□□□□ -0.48
Cd9P40240 Gm5186-201ENSMUST00000218781 920 ntBASIC12.06□□□□□ -0.48
Cd9P40240 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd9P40240 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd9P40240 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd9P40240 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.06□□□□□ -0.48
Cd9P40240 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd9P40240 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd9P40240 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd9P40240 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cd9P40240 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cd9P40240 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Cd9P40240 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.06□□□□□ -0.48
Cd9P40240 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Cd9P40240 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cd9P40240 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd9P40240 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd9P40240 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cd9P40240 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd9P40240 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd9P40240 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd9P40240 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd9P40240 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd9P40240 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd9P40240 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd9P40240 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
Cd9P40240 Gm14109-201ENSMUST00000118814 309 ntBASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms