Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Col8a2P25318 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Col8a2P25318 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Col8a2P25318 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Col8a2P25318 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Col8a2P25318 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Col8a2P25318 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Col8a2P25318 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Col8a2P25318 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Col8a2P25318 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Col8a2P25318 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Col8a2P25318 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.21□□□□□ -0.77
Col8a2P25318 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.21□□□□□ -0.77
Col8a2P25318 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.21□□□□□ -0.77
Col8a2P25318 Gm12164-201ENSMUST00000121695 551 ntBASIC10.21□□□□□ -0.77
Col8a2P25318 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.21□□□□□ -0.77
Col8a2P25318 Gm25732-201ENSMUST00000175168 60 ntBASIC10.21□□□□□ -0.77
Col8a2P25318 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Col8a2P25318 Gm32999-201ENSMUST00000192693 562 ntBASIC10.21□□□□□ -0.77
Col8a2P25318 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Col8a2P25318 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Col8a2P25318 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Col8a2P25318 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Col8a2P25318 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Col8a2P25318 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Col8a2P25318 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Col8a2P25318 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Col8a2P25318 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Col8a2P25318 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Col8a2P25318 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Col8a2P25318 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Col8a2P25318 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Col8a2P25318 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.21□□□□□ -0.78
Col8a2P25318 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.21□□□□□ -0.78
Col8a2P25318 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Col8a2P25318 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.21□□□□□ -0.78
Col8a2P25318 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Col8a2P25318 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Col8a2P25318 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Col8a2P25318 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Col8a2P25318 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a2P25318 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a2P25318 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Col8a2P25318 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a2P25318 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a2P25318 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a2P25318 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a2P25318 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a2P25318 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a2P25318 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a2P25318 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC10.2□□□□□ -0.78
Col8a2P25318 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.2□□□□□ -0.78
Col8a2P25318 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a2P25318 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a2P25318 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Col8a2P25318 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a2P25318 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.2□□□□□ -0.78
Col8a2P25318 Gm15711-201ENSMUST00000118889 535 ntBASIC10.2□□□□□ -0.78
Col8a2P25318 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a2P25318 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.2□□□□□ -0.78
Col8a2P25318 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a2P25318 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a2P25318 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a2P25318 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.2□□□□□ -0.78
Col8a2P25318 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC10.2□□□□□ -0.78
Col8a2P25318 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC10.2□□□□□ -0.78
Col8a2P25318 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a2P25318 Rn7s1-201ENSMUST00000174924 300 ntBASIC10.2□□□□□ -0.78
Col8a2P25318 Rn7s2-201ENSMUST00000175032 300 ntBASIC10.2□□□□□ -0.78
Col8a2P25318 Gm26461-201ENSMUST00000175064 290 ntBASIC10.2□□□□□ -0.78
Col8a2P25318 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.2□□□□□ -0.78
Col8a2P25318 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.2□□□□□ -0.78
Col8a2P25318 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Col8a2P25318 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.2□□□□□ -0.78
Col8a2P25318 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.2□□□□□ -0.78
Col8a2P25318 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.2□□□□□ -0.78
Col8a2P25318 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a2P25318 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a2P25318 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a2P25318 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a2P25318 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Col8a2P25318 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a2P25318 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a2P25318 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a2P25318 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a2P25318 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a2P25318 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a2P25318 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a2P25318 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a2P25318 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a2P25318 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a2P25318 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a2P25318 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a2P25318 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a2P25318 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a2P25318 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a2P25318 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Col8a2P25318 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a2P25318 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a2P25318 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms