Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04213 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04213 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04213 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.72□□□□□ -0.53
P04213 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04213 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
P04213 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P04213 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P04213 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04213 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P04213 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P04213 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04213 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.71□□□□□ -0.53
P04213 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04213 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.71□□□□□ -0.53
P04213 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P04213 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04213 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04213 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04213 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04213 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P04213 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04213 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04213 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04213 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04213 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P04213 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04213 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
P04213 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
P04213 Gm11793-201ENSMUST00000120433 981 ntBASIC11.71□□□□□ -0.53
P04213 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P04213 Gm14832-201ENSMUST00000121289 322 ntBASIC11.71□□□□□ -0.53
P04213 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P04213 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.71□□□□□ -0.53
P04213 Mospd4-201ENSMUST00000180618 576 ntBASIC11.71□□□□□ -0.53
P04213 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.71□□□□□ -0.53
P04213 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.71□□□□□ -0.53
P04213 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04213 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.71□□□□□ -0.53
P04213 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.71□□□□□ -0.53
P04213 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04213 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04213 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.71□□□□□ -0.53
P04213 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04213 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04213 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
P04213 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04213 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04213 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04213 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04213 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04213 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
P04213 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
P04213 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04213 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04213 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04213 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04213 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04213 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.71□□□□□ -0.54
P04213 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04213 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.71□□□□□ -0.54
P04213 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04213 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04213 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04213 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04213 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04213 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.7□□□□□ -0.54
P04213 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
P04213 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.7□□□□□ -0.54
P04213 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.7□□□□□ -0.54
P04213 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Gm8062-201ENSMUST00000139696 444 ntBASIC11.7□□□□□ -0.54
P04213 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.7□□□□□ -0.54
P04213 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.7□□□□□ -0.54
P04213 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.7□□□□□ -0.54
P04213 Mir7085-201ENSMUST00000184353 66 ntBASIC11.7□□□□□ -0.54
P04213 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.7□□□□□ -0.54
P04213 Gm42627-201ENSMUST00000197347 224 ntBASIC11.7□□□□□ -0.54
P04213 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.7□□□□□ -0.54
P04213 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms