Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Col4a1P02463 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col4a1P02463 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC14.74□□□□□ -0.05
Col4a1P02463 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.74□□□□□ -0.05
Col4a1P02463 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col4a1P02463 Gm4900-201ENSMUST00000222046 1628 ntBASIC14.74□□□□□ -0.05
Col4a1P02463 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col4a1P02463 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.74□□□□□ -0.05
Col4a1P02463 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col4a1P02463 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col4a1P02463 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col4a1P02463 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col4a1P02463 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Col4a1P02463 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col4a1P02463 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC14.74□□□□□ -0.05
Col4a1P02463 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC14.74□□□□□ -0.05
Col4a1P02463 Gm10807-201ENSMUST00000177134 795 ntBASIC14.74□□□□□ -0.05
Col4a1P02463 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col4a1P02463 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col4a1P02463 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col4a1P02463 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC14.74□□□□□ -0.05
Col4a1P02463 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a1P02463 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Col4a1P02463 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a1P02463 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Col4a1P02463 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a1P02463 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.73□□□□□ -0.05
Col4a1P02463 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a1P02463 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a1P02463 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC14.73□□□□□ -0.05
Col4a1P02463 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a1P02463 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a1P02463 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a1P02463 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a1P02463 Gm11244-201ENSMUST00000121243 237 ntBASIC14.73□□□□□ -0.05
Col4a1P02463 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC14.73□□□□□ -0.05
Col4a1P02463 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC14.73□□□□□ -0.05
Col4a1P02463 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a1P02463 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC14.73□□□□□ -0.05
Col4a1P02463 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
Col4a1P02463 Gm5982-201ENSMUST00000196234 512 ntBASIC14.73□□□□□ -0.05
Col4a1P02463 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.73□□□□□ -0.05
Col4a1P02463 AC115122.1-201ENSMUST00000224850 1040 ntBASIC14.73□□□□□ -0.05
Col4a1P02463 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a1P02463 Gm16380-201ENSMUST00000077997 478 ntBASIC14.73□□□□□ -0.05
Col4a1P02463 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a1P02463 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Col4a1P02463 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC14.73□□□□□ -0.05
Col4a1P02463 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Col4a1P02463 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a1P02463 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a1P02463 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a1P02463 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Col4a1P02463 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Col4a1P02463 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a1P02463 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a1P02463 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a1P02463 Gm37859-201ENSMUST00000195529 2173 ntBASIC14.73□□□□□ -0.05
Col4a1P02463 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a1P02463 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Col4a1P02463 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a1P02463 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a1P02463 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a1P02463 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a1P02463 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.72□□□□□ -0.05
Col4a1P02463 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a1P02463 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a1P02463 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a1P02463 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a1P02463 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Col4a1P02463 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a1P02463 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a1P02463 Gm19015-201ENSMUST00000184002 1189 ntBASIC14.72□□□□□ -0.05
Col4a1P02463 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Col4a1P02463 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC14.72□□□□□ -0.05
Col4a1P02463 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a1P02463 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a1P02463 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC14.72□□□□□ -0.05
Col4a1P02463 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a1P02463 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a1P02463 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Col4a1P02463 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a1P02463 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a1P02463 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a1P02463 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a1P02463 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a1P02463 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a1P02463 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a1P02463 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Col4a1P02463 Gm18642-201ENSMUST00000206642 1400 ntBASIC14.72□□□□□ -0.05
Col4a1P02463 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a1P02463 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC14.72□□□□□ -0.05
Col4a1P02463 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a1P02463 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a1P02463 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a1P02463 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col4a1P02463 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Col4a1P02463 Gm12628-201ENSMUST00000122193 382 ntBASIC14.71□□□□□ -0.05
Col4a1P02463 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC14.71□□□□□ -0.05
Col4a1P02463 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms